FFCP PHASE1:Hg19::chr12:9326236..9326239,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:9326236..9326239,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_at_chr12:9326236..9326239,+ | |description=CAGE_peak_at_chr12:9326236..9326239,+ | ||
|id=chr12:9326236..9326239,+ | |id=chr12:9326236..9326239,+ | ||
|ontology_enrichment_celltype=CL:0000624!2.52e-16!6;CL:0000791!4.30e-14!18;CL:0000789!4.30e-14!18;CL:0002420!4.30e-14!18;CL:0002419!4.30e-14!18;CL:0000790!4.30e-14!18;CL:0000623!4.07e-10!3;CL:0000825!4.07e-10!3;CL:0002150!1.15e-09!3;CL:0000861!1.15e-09!3;CL:0000084!1.58e-09!25;CL:0000827!1.58e-09!25;CL:0000898!5.96e-09!3;CL:0000542!2.27e-07!53;CL:0000051!2.27e-07!53 | |ontology_enrichment_celltype=CL:0000624!2.52e-16!6;CL:0000791!4.30e-14!18;CL:0000789!4.30e-14!18;CL:0002420!4.30e-14!18;CL:0002419!4.30e-14!18;CL:0000790!4.30e-14!18;CL:0000623!4.07e-10!3;CL:0000825!4.07e-10!3;CL:0002150!1.15e-09!3;CL:0000861!1.15e-09!3;CL:0000084!1.58e-09!25;CL:0000827!1.58e-09!25;CL:0000898!5.96e-09!3;CL:0000542!2.27e-07!53;CL:0000051!2.27e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000623;9.93e-41;3!CL:0000625;1.23e-11;11!CL:0000791;2.56e-07;18!CL:0000789;2.56e-07;18!CL:0002419;2.56e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,5.80e-41,3;CL:0000825,5.80e-41,3;CL:0000625,1.10e-11,11;CL:0000838,4.68e-09,52;CL:0000542,7.04e-09,53;CL:0000051,7.04e-09,53;CL:0000791,2.40e-07,18;CL:0000789,2.40e-07,18;CL:0002420,2.40e-07,18;CL:0002419,2.40e-07,18;CL:0000790,2.40e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;2.56e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!9.16e-20!9;UBERON:0001557!4.88e-13!19;UBERON:0002020!5.20e-13!34;UBERON:0003528!5.20e-13!34;UBERON:0001893!3.06e-11!34;UBERON:0001049!4.14e-11!57;UBERON:0005068!4.14e-11!57;UBERON:0006241!4.14e-11!57;UBERON:0007135!4.14e-11!57;UBERON:0002616!1.37e-10!59;UBERON:0001869!2.73e-10!32;UBERON:0002780!3.22e-10!41;UBERON:0001890!3.22e-10!41;UBERON:0006240!3.22e-10!41;UBERON:0002791!4.95e-10!33;UBERON:0003080!6.68e-10!42;UBERON:0002619!2.10e-09!22;UBERON:0001950!1.53e-08!20;UBERON:0000955!2.87e-08!69;UBERON:0006238!2.87e-08!69;UBERON:0006331!3.62e-08!3;UBERON:0000956!4.30e-08!25;UBERON:0000203!4.30e-08!25;UBERON:0001017!4.43e-08!82;UBERON:0000988!5.18e-08!3;UBERON:0005743!1.68e-07!86;UBERON:0002308!6.89e-07!9;UBERON:0000125!6.89e-07!9 | |ontology_enrichment_uberon=UBERON:0001737!9.16e-20!9;UBERON:0001557!4.88e-13!19;UBERON:0002020!5.20e-13!34;UBERON:0003528!5.20e-13!34;UBERON:0001893!3.06e-11!34;UBERON:0001049!4.14e-11!57;UBERON:0005068!4.14e-11!57;UBERON:0006241!4.14e-11!57;UBERON:0007135!4.14e-11!57;UBERON:0002616!1.37e-10!59;UBERON:0001869!2.73e-10!32;UBERON:0002780!3.22e-10!41;UBERON:0001890!3.22e-10!41;UBERON:0006240!3.22e-10!41;UBERON:0002791!4.95e-10!33;UBERON:0003080!6.68e-10!42;UBERON:0002619!2.10e-09!22;UBERON:0001950!1.53e-08!20;UBERON:0000955!2.87e-08!69;UBERON:0006238!2.87e-08!69;UBERON:0006331!3.62e-08!3;UBERON:0000956!4.30e-08!25;UBERON:0000203!4.30e-08!25;UBERON:0001017!4.43e-08!82;UBERON:0000988!5.18e-08!3;UBERON:0005743!1.68e-07!86;UBERON:0002308!6.89e-07!9;UBERON:0000125!6.89e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.76e-14;9!UBERON:0001557;8.76e-14;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.00e-13,9;UBERON:0001557,8.63e-07,19 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601633342410425,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0.786021525498329,0.616804496998528,0,0.32592226663359,0,0,0,0.294605907474837,0.221533894583621,0,0,0,0,0,0.289803085735052,0.14828656316206,0,0,0.453237370790265,0.383220493601921,0.68725489096526,0.253019692019503,0,0,0,0,0,0,0.473554504088034,0,1.41124720257313,8.82552646085574,3.04131248153878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828147600278907,1.18009283054671,1.20505514941741,1.10293972732394,0.435758888184812,0.474541238222193,0.539325232640658,0,0.38474715694639,0,0,0,0,0,0,1.77236972004421,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32072651019839,0.829312462163088,0.288239906833923,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0,0,0,1.57624608161542,7.54696512008311,2.56686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569647187174163,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0.423347165447766,0,0.280797178113459,0.228234679033192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221158519862449,0,0,0.762569244632931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.774050650312681,1.0232504392066,1.06750094169172,0,0,0,0,0,0.126621591911757,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0.170388021785422,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0.478901577171454,0,0.252071696221718,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0,0,0,0,0.203909198930495,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:9326236..9326239,+ | |short_description=p@chr12:9326236..9326239,+ | ||
}} | }} |
Latest revision as of 13:38, 24 July 2015
Short description: | p@chr12:9326236..9326239, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:9326236..9326239, + |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 5.80e-41 | 3 |
pro-NK cell | 5.80e-41 | 3 |
CD8-positive, alpha-beta T cell | 1.10e-11 | 11 |
lymphoid lineage restricted progenitor cell | 4.68e-09 | 52 |
lymphocyte | 7.04e-09 | 53 |
common lymphoid progenitor | 7.04e-09 | 53 |
mature alpha-beta T cell | 2.40e-07 | 18 |
alpha-beta T cell | 2.40e-07 | 18 |
immature T cell | 2.40e-07 | 18 |
mature T cell | 2.40e-07 | 18 |
immature alpha-beta T cell | 2.40e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.00e-13 | 9 |
upper respiratory tract | 8.63e-07 | 19 |