FFCP PHASE1:Hg19::chr13:50903755..50903759,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13747 | |HGNC=13747 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-10bp_to_ENST00000489542,uc001vep.1_5end | |association_with_transcript=-10bp_to_ENST00000489542,uc001vep.1_5end | ||
|cluster_id=chr13:50903755..50903759,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_3_at_DLEU1_5end | |description=CAGE_peak_3_at_DLEU1_5end | ||
|id=chr13:50903755..50903759,+ | |id=chr13:50903755..50903759,+ | ||
|ontology_enrichment_celltype=CL:0002127!2.06e-15!1;CL:0000914!2.06e-15!1;CL:0000911!2.06e-15!1;CL:0000814!2.06e-15!1;CL:0002042!2.06e-15!1;CL:0002039!2.06e-15!1;CL:0002040!2.06e-15!1;CL:0002041!2.06e-15!1;CL:0000893!2.31e-08!2;CL:0002489!2.31e-08!2;CL:0000809!2.31e-08!2;CL:0000808!2.31e-08!2;CL:0000894!2.31e-08!2;CL:0000806!2.31e-08!2;CL:0000807!2.31e-08!2;CL:0000805!2.31e-08!2;CL:0002425!2.31e-08!2 | |ontology_enrichment_celltype=CL:0002127!2.06e-15!1;CL:0000914!2.06e-15!1;CL:0000911!2.06e-15!1;CL:0000814!2.06e-15!1;CL:0002042!2.06e-15!1;CL:0002039!2.06e-15!1;CL:0002040!2.06e-15!1;CL:0002041!2.06e-15!1;CL:0000893!2.31e-08!2;CL:0002489!2.31e-08!2;CL:0000809!2.31e-08!2;CL:0000808!2.31e-08!2;CL:0000894!2.31e-08!2;CL:0000806!2.31e-08!2;CL:0000807!2.31e-08!2;CL:0000805!2.31e-08!2;CL:0002425!2.31e-08!2 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |||
|ontology_enrichment_disease=DOID:2355!2.38e-15!1;DOID:74!2.48e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001874!1.34e-15!1;UBERON:0002336!3.66e-15!1;UBERON:0001018!3.66e-15!1;UBERON:0002473!3.66e-15!1;UBERON:0005340!3.66e-15!1;UBERON:0002316!3.66e-15!1;UBERON:0003544!3.66e-15!1;UBERON:0001020!3.66e-15!1;UBERON:0005970!3.66e-15!1;UBERON:0002437!3.66e-15!1;UBERON:0005743!1.35e-09!86;UBERON:0000073!1.23e-08!94;UBERON:0001016!1.23e-08!94;UBERON:0001049!1.48e-08!57;UBERON:0005068!1.48e-08!57;UBERON:0006241!1.48e-08!57;UBERON:0007135!1.48e-08!57;UBERON:0001876!1.50e-08!2;UBERON:0002148!2.15e-08!2;UBERON:0009662!2.15e-08!2;UBERON:0000473!3.04e-08!8;UBERON:0005162!3.08e-08!2;UBERON:0000122!3.08e-08!2;UBERON:0001871!3.77e-08!7;UBERON:0001017!8.79e-08!82;UBERON:0003075!1.80e-07!86;UBERON:0007284!1.80e-07!86;UBERON:0002420!2.60e-07!9;UBERON:0007245!2.60e-07!9;UBERON:0010009!2.60e-07!9;UBERON:0010011!2.60e-07!9;UBERON:0000454!2.60e-07!9;UBERON:0002308!3.04e-07!9;UBERON:0000125!3.04e-07!9;UBERON:0007023!3.32e-07!115;UBERON:0002346!4.06e-07!90;UBERON:0002791!5.81e-07!33;UBERON:0000955!6.40e-07!69;UBERON:0006238!6.40e-07!69;UBERON:0002020!8.40e-07!34;UBERON:0003528!8.40e-07!34;UBERON:0001893!9.08e-07!34 | |ontology_enrichment_uberon=UBERON:0001874!1.34e-15!1;UBERON:0002336!3.66e-15!1;UBERON:0001018!3.66e-15!1;UBERON:0002473!3.66e-15!1;UBERON:0005340!3.66e-15!1;UBERON:0002316!3.66e-15!1;UBERON:0003544!3.66e-15!1;UBERON:0001020!3.66e-15!1;UBERON:0005970!3.66e-15!1;UBERON:0002437!3.66e-15!1;UBERON:0005743!1.35e-09!86;UBERON:0000073!1.23e-08!94;UBERON:0001016!1.23e-08!94;UBERON:0001049!1.48e-08!57;UBERON:0005068!1.48e-08!57;UBERON:0006241!1.48e-08!57;UBERON:0007135!1.48e-08!57;UBERON:0001876!1.50e-08!2;UBERON:0002148!2.15e-08!2;UBERON:0009662!2.15e-08!2;UBERON:0000473!3.04e-08!8;UBERON:0005162!3.08e-08!2;UBERON:0000122!3.08e-08!2;UBERON:0001871!3.77e-08!7;UBERON:0001017!8.79e-08!82;UBERON:0003075!1.80e-07!86;UBERON:0007284!1.80e-07!86;UBERON:0002420!2.60e-07!9;UBERON:0007245!2.60e-07!9;UBERON:0010009!2.60e-07!9;UBERON:0010011!2.60e-07!9;UBERON:0000454!2.60e-07!9;UBERON:0002308!3.04e-07!9;UBERON:0000125!3.04e-07!9;UBERON:0007023!3.32e-07!115;UBERON:0002346!4.06e-07!90;UBERON:0002791!5.81e-07!33;UBERON:0000955!6.40e-07!69;UBERON:0006238!6.40e-07!69;UBERON:0002020!8.40e-07!34;UBERON:0003528!8.40e-07!34;UBERON:0001893!9.08e-07!34 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1218035501107,7.502995644373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5062593682237,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1218035501107,7.502995644373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@DLEU1 | |short_description=p3@DLEU1 | ||
}} | }} |
Latest revision as of 17:56, 17 September 2015
Short description: | p3@DLEU1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_DLEU1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | -10bp_to_ENST00000489542, uc001vep.1_5end |
EntrezGene: | NA |
HGNC: | 13747 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |