FFCP PHASE1:Hg19::chr19:2248006..2248017,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:2248006..2248017,+ | |||
|description=CAGE_peak_at_chr19:2248006..2248017,+ | |description=CAGE_peak_at_chr19:2248006..2248017,+ | ||
|id=chr19:2248006..2248017,+ | |id=chr19:2248006..2248017,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;5.54e-26;5!CL:0002567;8.65e-20;3!CL:0000163;9.52e-15;9!CL:0000317;2.15e-08;2!CL:1000448;2.15e-08;2!CL:0002308;2.15e-08;2!CL:0002363;2.15e-08;2!CL:0002140;2.15e-08;2!CL:0000362;3.24e-07;9!CL:0002077;3.29e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,4.68e-26,5;CL:0002028,4.68e-26,5;CL:0002567,1.05e-19,3;CL:0000163,8.67e-15,9;CL:0000317,2.31e-08,2;CL:1000448,2.31e-08,2;CL:0002308,2.31e-08,2;CL:0002140,2.31e-08,2;CL:0002363,2.87e-08,2;CL:0000008,2.87e-08,2;CL:0000362,3.67e-07,9;CL:0002077,7.03e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000008;2.15e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;4.36e-09;15!UBERON:0007376;4.36e-09;15!UBERON:0002419;2.15e-08;2!UBERON:0003566;2.15e-08;2!UBERON:0007771;2.15e-08;2!UBERON:0003297;2.15e-08;2!UBERON:0001821;2.15e-08;2!UBERON:0003487;2.15e-08;2!UBERON:0001777;2.15e-08;2!UBERON:0001820;2.15e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,4.36e-09,15;UBERON:0007376,4.36e-09,15;UBERON:0007383,4.36e-09,15;UBERON:0002419,2.31e-08,2;UBERON:0007771,2.31e-08,2;UBERON:0003297,2.31e-08,2;UBERON:0001821,2.31e-08,2;UBERON:0003487,2.31e-08,2;UBERON:0001820,2.31e-08,2;UBERON:0005089,2.31e-08,2;UBERON:0005088,2.31e-08,2;UBERON:0003566,2.87e-08,2;UBERON:0001777,2.87e-08,2 | |||
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| ||
|short_description=p@chr19:2248006..2248017,+ | |short_description=p@chr19:2248006..2248017,+ | ||
}} | }} |
Latest revision as of 05:46, 26 July 2015
Short description: | p@chr19:2248006..2248017, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:2248006..2248017, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 4.68e-26 | 5 |
basophil mast progenitor cell | 4.68e-26 | 5 |
light melanocyte | 1.05e-19 | 3 |
endocrine cell | 8.67e-15 | 9 |
sebum secreting cell | 2.31e-08 | 2 |
epithelial cell of sweat gland | 2.31e-08 | 2 |
epithelial cell of skin gland | 2.31e-08 | 2 |
acinar cell of sebaceous gland | 2.31e-08 | 2 |
keratocyte | 2.87e-08 | 2 |
migratory cranial neural crest cell | 2.87e-08 | 2 |
epidermal cell | 3.67e-07 | 9 |
ecto-epithelial cell | 7.03e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 4.36e-09 | 15 |
outer epithelium | 4.36e-09 | 15 |
enveloping layer of ectoderm | 4.36e-09 | 15 |
skin gland | 2.31e-08 | 2 |
epidermis gland | 2.31e-08 | 2 |
gland of integumental system | 2.31e-08 | 2 |
sebaceous gland | 2.31e-08 | 2 |
skin sebaceous gland | 2.31e-08 | 2 |
sweat gland | 2.31e-08 | 2 |
sweat gland placode | 2.31e-08 | 2 |
sebaceous gland placode | 2.31e-08 | 2 |
head connective tissue | 2.87e-08 | 2 |
substantia propria of cornea | 2.87e-08 | 2 |