FFCP PHASE1:Hg19::chr19:40195101..40195131,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=56891 | |EntrezGene=56891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30054 | |HGNC=30054 | ||
|TSSclassifier=strong | |||
|UniProt=A8MPV8,Q8TCE9,B2R530 | |UniProt=A8MPV8,Q8TCE9,B2R530 | ||
|association_with_transcript=155bp_to_ENST00000360675,ENST00000392052,NM_020129,NM_203471,uc002omf.2,uc002omg.2_5end | |association_with_transcript=155bp_to_ENST00000360675,ENST00000392052,NM_020129,NM_203471,uc002omf.2,uc002omg.2_5end | ||
|cluster_id=chr19:40195101..40195131,+ | |||
|coexpression_cluster_id=C34 | |||
|description=CAGE_peak_1_at_LGALS14_5end | |description=CAGE_peak_1_at_LGALS14_5end | ||
|id=chr19:40195101..40195131,+ | |id=chr19:40195101..40195131,+ | ||
|ontology_enrichment_celltype=CL:0002541!9.87e-15!3;CL:0000764!1.05e-09!2;CL:0000765!1.05e-09!2;CL:0000050!1.05e-09!2;CL:0000038!1.05e-09!2;CL:0000558!1.05e-09!2;CL:0000547!1.05e-09!2;CL:0000549!1.05e-09!2;CL:0000550!1.05e-09!2;CL:0000552!1.05e-09!2;CL:0000945!3.93e-08!24;CL:0000826!3.93e-08!24 | |ontology_enrichment_celltype=CL:0002541!9.87e-15!3;CL:0000764!1.05e-09!2;CL:0000765!1.05e-09!2;CL:0000050!1.05e-09!2;CL:0000038!1.05e-09!2;CL:0000558!1.05e-09!2;CL:0000547!1.05e-09!2;CL:0000549!1.05e-09!2;CL:0000550!1.05e-09!2;CL:0000552!1.05e-09!2;CL:0000945!3.93e-08!24;CL:0000826!3.93e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.14e-32;3!CL:0000945;1.03e-10;24!CL:0000349;3.67e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.14e-32,3;CL:0000945,9.47e-11,24;CL:0000826,9.47e-11,24;CL:0000349,3.75e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;2.63e-12;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;6.26e-12;1!DOID:0050177;6.26e-12;1!DOID:0050427;6.26e-12;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,6.26e-12,1;DOID:0050177,6.26e-12,1;DOID:0050427,6.26e-12,1 | |||
|ontology_enrichment_uberon=UBERON:0000476!9.87e-15!3;UBERON:0000920!9.87e-15!3;UBERON:0005631!3.01e-11!14;UBERON:0000158!3.01e-11!14;UBERON:0003124!5.81e-11!7;UBERON:0000478!8.78e-11!24;UBERON:0000995!7.19e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.14e-32;3!UBERON:0000920;1.14e-32;3!UBERON:0005631;3.33e-17;10!UBERON:0000158;3.33e-17;10!UBERON:0000478;5.02e-11;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.14e-32,3;UBERON:0003124,7.81e-25,7;UBERON:0005631,6.18e-19,14;UBERON:0000158,6.18e-19,14;UBERON:0000478,5.13e-11,24 | |||
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| ||
|short_description=p1@LGALS14 | |short_description=p1@LGALS14 | ||
}} | }} |
Latest revision as of 00:14, 18 September 2015
Short description: | p1@LGALS14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LGALS14_5end |
Coexpression cluster: | C34_placenta_chorionic_choriocarcinoma_mesothelioma_Wilms_Smooth_bile |
Association with transcript: | 155bp_to_ENST00000360675, ENST00000392052, NM_020129, NM_203471, uc002omf.2, uc002omg.2_5end |
EntrezGene: | LGALS14 |
HGNC: | 30054 |
UniProt: | A8MPV8Q8TCE9B2R530 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.14e-32 | 3 |
lymphocyte of B lineage | 9.47e-11 | 24 |
pro-B cell | 9.47e-11 | 24 |
extraembryonic cell | 3.75e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.14e-32 | 3 |
chorion | 7.81e-25 | 7 |
extraembryonic membrane | 6.18e-19 | 14 |
membranous layer | 6.18e-19 | 14 |
extraembryonic structure | 5.13e-11 | 24 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 6.26e-12 | 1 |
monogenic disease | 6.26e-12 | 1 |
xeroderma pigmentosum | 6.26e-12 | 1 |