FFCP PHASE1:Hg19::chr19:45322971..45322990,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:45322971..45322990,+ | |||
|coexpression_cluster_id=C924 | |||
|description=CAGE_peak_at_chr19:45322971..45322990,+ | |description=CAGE_peak_at_chr19:45322971..45322990,+ | ||
|id=chr19:45322971..45322990,+ | |id=chr19:45322971..45322990,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.34e-19!254;CL:0000223!3.07e-08!59;CL:0002076!7.49e-08!43 | |ontology_enrichment_celltype=CL:0000066!1.34e-19!254;CL:0000223!3.07e-08!59;CL:0002076!7.49e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0002076;9.39e-10;42!CL:0000077;5.29e-07;19!CL:0002251;8.84e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,9.28e-18,253;CL:0000223,4.09e-16,58;CL:0000076,8.23e-13,63;CL:0002076,3.10e-11,42;CL:0000077,4.40e-07,19;CL:0002251,6.79e-07,20 | |||
|ontology_enrichment_development_v019=CL:0000223;6.18e-09;58 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.20e-13;14!DOID:305;1.05e-07;106!DOID:7;2.87e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.28e-19,106;DOID:0050687,3.33e-14,143;DOID:1749,8.89e-14,14;DOID:162,5.84e-13,235;DOID:14566,1.60e-12,239;DOID:7,1.55e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.14e-09!169;UBERON:0000925!2.14e-09!169;UBERON:0006595!2.14e-09!169;UBERON:0005157!4.86e-09!51;UBERON:0005911!6.71e-09!82;UBERON:0005153!1.78e-08!37;UBERON:0001007!1.26e-07!155;UBERON:0001555!1.26e-07!155;UBERON:0007026!1.26e-07!155;UBERON:0003101!1.37e-07!22;UBERON:0000079!1.37e-07!22;UBERON:0006554!3.66e-07!44;UBERON:0000481!4.34e-07!347;UBERON:0001008!8.06e-07!45;UBERON:0005156!8.26e-07!59;UBERON:0000990!8.26e-07!59;UBERON:0001048!9.33e-07!168 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;4.22e-10;4!UBERON:0004785;4.22e-10;4!UBERON:0000974;7.39e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,3.32e-10,4;UBERON:0004785,3.32e-10,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0.123121058076788,0.408001382488506,0.313454721478088,0.286235987131057,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0.361439152384566,0,0.434539556882471,0,0,0.189069634328136,0.443458794925128,0.175669571386252,0.458426764241994,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66944122552934,0,0,0.488124115096339,0.367663080345869,0,0,0,0,0,0,0.183201743930407,0,0,0.872188104285069,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0.103325781175765,0,0,0.910161361938026,0,0,0,0,0,0,0,0.113432183160021,0.358779271377724,0.213557388818567,0,0,0.103052529238439,0,0,0,0,0,0,0.161646056818812,0,0.10075209822764,0.169560592310488,0,0,0,1.09776335516636,0.265059536642971,0,0.207322110030741,0,0.36497735907583,0,0.643240938192885,0,0,0,0.236613600079688,0,0.241011029883482,0.110293972732394,0,0.237270619111097,0,0.196221465125346,0,0,0,0,0,0,0,0,0,1.8448265781467,0.171567810298526,1.42675371031213,0,1.40740561376283,2.96283024507295,0,0,0,0.579652024875384,0,0,0,0.380508304469197,0,0.858486162094873,0,0,0,0.93733833986777,0.16798212819886,0,0.447792613514241,0,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0.542621605391443,0,0,0.355391948742546,0,0,0,0.399891964728228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54657762555539,0,0,0,0,0,0.24538298343828,1.50051156317903,0,0.207970861530807,0.178428988797162,0.157702415033935,0.117141414992713,0,0,0,0,0,0.0868836144680828,0.391602314925481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0,0,0,2.53804844142407,0.40101294060657,1.10497186723076,0,0.364182336013434,0.262248829918848,0,0.462092022626489,0.784349769176855,0,0.105551628892876,0,0,0,0,0.270946437543853,0.501689773854853,0.509752546090077,0.831076008928724,0,1.09629938322967,0.522870902049801,0,0.328014645699706,0,0.412164046590889,0.366277859273374,0.247528499761764,0,0.650060246036521,0,0.48335359146061,0.154048617114644,0,0.137836572484531,0.214840489736547,0,0.0852266274161009,0.267096106940212,0.826424576804891,0.768760269460425,1.14851441245126,0.30347334256665,0.464845549297286,0.31481234683064,0,0,0,0,0.18532421910392,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0.48763373908959,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,0,0.886860307073351,0,0,0,0,0,0,0,0,0.79312517629427,0,0.962479855263359,1.22520107990516,0,0,0,0,0,0,0.635020748171649,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0.121360521749513,0,0.568272293612826,0,0,0,0,0.140669416410513,0.333926115068718,0,3.1668811219199,0.597743964753209,0,1.25966373927138,0.306806047506464,0,0,0,0.358042349351218,0,0.0986434056369336,0,0,0,0,0,0,1.57427999993152,0,1.82069517256799,0.762760950878299,2.6002644994473,0,0,0,0,0.120596438625408,0,0.552896299656123,0,0,0.10893846351899,2.64905114129346,0.153900517007594,0,0.23056390438806,2.06442582142476,0.760531603454056,0,0.0915975934018623,0,0,0,0,0,0,0,0,0.158936578980379,0.210998064528027,0.979396848954886,0.989471500037586,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0.789168805698781,0,0,0.063186579628488,0,0.414752765588989,0,0.661983911750998,0,0,1.42304773014896,0,1.56203764501618,3.42973390950322,0.609414446062818,0.698906672968121,0,0,0,0,0.0969890164884194,0.0882561266915003,0,0,0,0.189932387867636,1.17330829640882,0.480952921509202,0.213452994739353,0.39961921916426,0.288180834308212,0.114536596165916,1.37275998289572,0.432164393964449,0.248505071130865,0.235694034616795,0,0.523014231561666,0.101998217636322,0,0,0.273810757783986,0,0,0,0.279282401272254,0.916641696046735,0.717873024576814,0.798716001995964,0.858452096273142,0,0.403100834920358,0,0,2.36349546921671,1.2362378757175,2.83094884187577,1.96854963029498,0,0,0.272406812223151,0.321506296930038,0.275078873194468,0.415440338029185,0.2249738915515,0,0.242998226632099,2.0126081255956,0.472834243795189,0.524545881349981,0,0,0.383830394638891,0,0,0.25426853765475,0,0,0,1.19730191562487,0.082092520749339,0,0.226624183040251,0,0,0.129282956361551,0.26446520348538,0,0.704815022316672,0.106787412567695,0.78602152549833,0.828478110694391,0,0,0,0,0,0.2506898940227,0,0,1.41348686625211,0,0,0.1251909307065,0,0.221858103073705,0.124192805882767,0,0.499921631848426,0,0.285465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0,0,0,0,0.322231671127465,0,0.398095888698616,0,0,0,0,0,3.00218227924896,1.56596575179127,1.81364740409818,0.231522474323834,1.22368352253234,0,2.47041157728778,0.877136198314828,0.883445729729405,0.964570191354574,0,0.256241518587947,1.72715170865599,0,0.138258436151731,0,0,0,0,0.245772908753719,0.211312123358627,0,0.106691729694141,0,0,0,0.139879507719444,1.86623178009892,0,0,0.1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| ||
|short_description=p@chr19:45322971..45322990,+ | |short_description=p@chr19:45322971..45322990,+ | ||
}} | }} |
Latest revision as of 14:45, 27 July 2015
Short description: | p@chr19:45322971..45322990, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:45322971..45322990, + |
Coexpression cluster: | C924_oral_cervical_smallcell_serous_Keratinocyte_Prostate_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 9.28e-18 | 253 |
endodermal cell | 4.09e-16 | 58 |
squamous epithelial cell | 8.23e-13 | 63 |
endo-epithelial cell | 3.10e-11 | 42 |
mesothelial cell | 4.40e-07 | 19 |
epithelial cell of alimentary canal | 6.79e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 3.32e-10 | 4 |
respiratory system mucosa | 3.32e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.28e-19 | 106 |
cell type cancer | 3.33e-14 | 143 |
squamous cell carcinoma | 8.89e-14 | 14 |
cancer | 5.84e-13 | 235 |
disease of cellular proliferation | 1.60e-12 | 239 |
disease of anatomical entity | 1.55e-08 | 39 |