FFCP PHASE1:Hg19::chr1:115782441..115782454,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:115782441..115782454,+ | |||
|coexpression_cluster_id=C3851 | |||
|description=CAGE_peak_at_chr1:115782441..115782454,+ | |description=CAGE_peak_at_chr1:115782441..115782454,+ | ||
|id=chr1:115782441..115782454,+ | |id=chr1:115782441..115782454,+ | ||
|ontology_enrichment_celltype=CL:0002620!1.70e-35!23;CL:0000057!6.41e-34!75;CL:0002334!1.72e-16!12;CL:0000055!9.35e-16!180;CL:1000306!1.58e-14!4;CL:0002547!1.58e-14!4;CL:0002570!4.17e-11!8;CL:0000197!2.60e-10!6;CL:0000098!2.60e-10!6;CL:0002167!2.60e-10!6;CL:0000134!2.00e-08!358;CL:0002320!4.46e-08!365;CL:0000569!4.60e-08!4;CL:0000011!4.60e-08!4;CL:0000219!1.74e-07!390;CL:0002583!2.06e-07!2;CL:0000048!4.93e-07!430;CL:0000723!8.52e-07!436 | |ontology_enrichment_celltype=CL:0002620!1.70e-35!23;CL:0000057!6.41e-34!75;CL:0002334!1.72e-16!12;CL:0000055!9.35e-16!180;CL:1000306!1.58e-14!4;CL:0002547!1.58e-14!4;CL:0002570!4.17e-11!8;CL:0000197!2.60e-10!6;CL:0000098!2.60e-10!6;CL:0002167!2.60e-10!6;CL:0000134!2.00e-08!358;CL:0002320!4.46e-08!365;CL:0000569!4.60e-08!4;CL:0000011!4.60e-08!4;CL:0000219!1.74e-07!390;CL:0002583!2.06e-07!2;CL:0000048!4.93e-07!430;CL:0000723!8.52e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000197;1.12e-24;6!CL:0000098;1.12e-24;6!CL:0002167;1.12e-24;6!CL:0002620;7.96e-14;23!CL:0000222;7.39e-11;1!CL:0002570;1.11e-10;8!CL:1000306;4.34e-10;4!CL:0002547;4.34e-10;4!CL:0000710;1.52e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000197,1.20e-24,6;CL:0000098,1.20e-24,6;CL:0002167,1.20e-24,6;CL:0002620,7.45e-14,23;CL:0002570,8.80e-11,8;CL:1000306,5.46e-10,4;CL:0002547,5.46e-10,4;CL:0000710,1.55e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!6.78e-18!5;DOID:450!6.78e-18!5;DOID:66!6.78e-18!5;DOID:423!6.78e-18!5;DOID:0080000!6.78e-18!5;DOID:11722!6.78e-18!5 | |||
|ontology_enrichment_disease_v019=DOID:2513;6.72e-11;1!DOID:17;4.06e-08;5!DOID:450;4.06e-08;5!DOID:66;4.06e-08;5!DOID:423;4.06e-08;5!DOID:0080000;4.06e-08;5!DOID:11722;4.06e-08;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,6.73e-11,1;DOID:17,3.52e-08,5;DOID:450,3.52e-08,5;DOID:66,3.52e-08,5;DOID:423,3.52e-08,5;DOID:0080000,3.52e-08,5;DOID:11722,3.52e-08,5 | |||
|ontology_enrichment_uberon=UBERON:0002199!2.11e-23!45;UBERON:0002416!2.11e-23!45;UBERON:0002097!1.87e-21!40;UBERON:0000415!1.58e-14!4;UBERON:0007240!1.58e-14!4;UBERON:0005742!1.58e-14!4;UBERON:0005734!1.58e-14!4;UBERON:0004664!1.58e-14!4;UBERON:0004663!1.58e-14!4;UBERON:0003102!3.64e-12!95;UBERON:0002384!3.05e-08!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;4.34e-10;4!UBERON:0000415;4.34e-10;4!UBERON:0007240;4.34e-10;4!UBERON:0005742;4.34e-10;4!UBERON:0005734;4.34e-10;4!UBERON:0004664;4.34e-10;4!UBERON:0004663;4.34e-10;4!UBERON:0002199;2.56e-08;46!UBERON:0002416;2.56e-08;46!UBERON:0002097;7.00e-08;41 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,3.07e-10,41;UBERON:0000415,5.46e-10,4;UBERON:0007240,5.46e-10,4;UBERON:0005742,5.46e-10,4;UBERON:0005734,5.46e-10,4;UBERON:0004664,5.46e-10,4;UBERON:0004663,5.46e-10,4;UBERON:0002199,4.80e-09,46;UBERON:0002416,4.80e-09,46 | |||
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| ||
|short_description=p@chr1:115782441..115782454,+ | |short_description=p@chr1:115782441..115782454,+ | ||
}} | }} |
Latest revision as of 20:01, 27 July 2015
Short description: | p@chr1:115782441..115782454, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:115782441..115782454, + |
Coexpression cluster: | C3851_basal_Fibroblast_mesodermal_Olfactory_mesenchymal_Myoblast_neurofibroma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
receptor cell | 1.20e-24 | 6 |
sensory epithelial cell | 1.20e-24 | 6 |
olfactory epithelial cell | 1.20e-24 | 6 |
skin fibroblast | 7.45e-14 | 23 |
mesenchymal stem cell of adipose | 8.80e-11 | 8 |
fibroblast of tunica adventitia of artery | 5.46e-10 | 4 |
fibroblast of the aortic adventitia | 5.46e-10 | 4 |
neurecto-epithelial cell | 1.55e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
skin of body | 3.07e-10 | 41 |
artery wall | 5.46e-10 | 4 |
tunica adventitia of artery | 5.46e-10 | 4 |
adventitia | 5.46e-10 | 4 |
tunica adventitia of blood vessel | 5.46e-10 | 4 |
aorta tunica adventitia | 5.46e-10 | 4 |
aorta wall | 5.46e-10 | 4 |
integument | 4.80e-09 | 46 |
integumental system | 4.80e-09 | 46 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 6.73e-11 | 1 |
musculoskeletal system disease | 3.52e-08 | 5 |
myotonic disease | 3.52e-08 | 5 |
muscle tissue disease | 3.52e-08 | 5 |
myopathy | 3.52e-08 | 5 |
muscular disease | 3.52e-08 | 5 |
myotonic dystrophy | 3.52e-08 | 5 |