FFCP PHASE1:Hg19::chr15:23692388..23692392,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=Q8N9W4,A1L302 | |UniProt=Q8N9W4,A1L302 | ||
|association_with_transcript=0bp_to_uc001ywg.1,uc010ayh.1_5end | |association_with_transcript=0bp_to_uc001ywg.1,uc010ayh.1_5end | ||
|cluster_id=chr15:23692388..23692392,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_uc001ywg.1_5end,CAGE_peak_1_at_uc010ayh.1_5end | |description=CAGE_peak_1_at_uc001ywg.1_5end,CAGE_peak_1_at_uc010ayh.1_5end | ||
|id=chr15:23692388..23692392,- | |id=chr15:23692388..23692392,- | ||
|ontology_enrichment_celltype=CL:0002253!2.04e-18!2;CL:0002251!2.08e-14!21;CL:0000167!3.10e-10!1;CL:0000164!3.10e-10!1;CL:0000502!3.10e-10!1;CL:0000172!3.10e-10!1;CL:0000173!3.10e-10!1;CL:0002351!3.10e-10!1;CL:0002563!1.12e-09!4;CL:0002076!8.40e-07!43 | |ontology_enrichment_celltype=CL:0002253!2.04e-18!2;CL:0002251!2.08e-14!21;CL:0000167!3.10e-10!1;CL:0000164!3.10e-10!1;CL:0000502!3.10e-10!1;CL:0000172!3.10e-10!1;CL:0000173!3.10e-10!1;CL:0002351!3.10e-10!1;CL:0002563!1.12e-09!4;CL:0002076!8.40e-07!43 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;7.73e-21;10!UBERON:0005564;7.73e-21;10 | |||
|ontology_enrichment_disease=DOID:1749!5.55e-22!14;DOID:5409!4.31e-20!4;DOID:305!9.46e-16!106;DOID:0050687!9.58e-13!143;DOID:1325!9.79e-12!7;DOID:3904!9.79e-12!7;DOID:4430!3.10e-10!1;DOID:162!4.34e-10!235;DOID:14566!8.20e-10!239;DOID:3905!3.04e-09!9;DOID:299!1.69e-08!25 | |ontology_enrichment_disease=DOID:1749!5.55e-22!14;DOID:5409!4.31e-20!4;DOID:305!9.46e-16!106;DOID:0050687!9.58e-13!143;DOID:1325!9.79e-12!7;DOID:3904!9.79e-12!7;DOID:4430!3.10e-10!1;DOID:162!4.34e-10!235;DOID:14566!8.20e-10!239;DOID:3905!3.04e-09!9;DOID:299!1.69e-08!25 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003343!3.54e-20!4;UBERON:0004785!3.54e-20!4;UBERON:0000344!5.02e-18!12;UBERON:0003729!2.87e-16!5;UBERON:0000997!9.82e-10!1;UBERON:0005056!9.82e-10!1;UBERON:0001052!1.12e-09!4;UBERON:0001242!1.12e-09!4;UBERON:0001262!1.12e-09!4;UBERON:0004786!1.12e-09!4;UBERON:0004808!1.12e-09!4;UBERON:0001277!1.12e-09!4;UBERON:0000974!2.11e-08!10;UBERON:0003350!6.54e-08!5;UBERON:0004907!6.54e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;9.81e-26;8!UBERON:0003135;4.69e-19;11!UBERON:0003343;1.29e-13;4!UBERON:0004785;1.29e-13;4!UBERON:0000991;1.61e-10;21!UBERON:0003101;4.33e-10;22!UBERON:0000079;4.33e-10;22!UBERON:0000974;1.57e-09;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,9.81e-26,8;UBERON:0003135,4.69e-19,11;UBERON:0003343,1.29e-13,4;UBERON:0004785,1.29e-13,4;UBERON:0000991,1.61e-10,21;UBERON:0009196,1.61e-10,21;UBERON:0009117,1.61e-10,21;UBERON:0005564,1.61e-10,21;UBERON:0004176,4.33e-10,22;UBERON:0003101,4.33e-10,22;UBERON:0000079,4.33e-10,22 | |||
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|short_description=p1@uc001ywg.1,p1@uc010ayh.1 | |short_description=p1@uc001ywg.1,p1@uc010ayh.1 | ||
}} | }} |
Latest revision as of 23:39, 16 September 2015
Short description: | p1@uc001ywg.1, p1@uc010ayh.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc001ywg.1_5end, CAGE_peak_1_at_uc010ayh.1_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_uc001ywg.1, uc010ayh.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 9.81e-26 | 8 |
male reproductive organ | 4.69e-19 | 11 |
mucosa of oral region | 1.29e-13 | 4 |
respiratory system mucosa | 1.29e-13 | 4 |
gonad | 1.61e-10 | 21 |
indifferent external genitalia | 1.61e-10 | 21 |
indifferent gonad | 1.61e-10 | 21 |
gonad primordium | 1.61e-10 | 21 |
external genitalia | 4.33e-10 | 22 |
male organism | 4.33e-10 | 22 |
male reproductive system | 4.33e-10 | 22 |