FFCP PHASE1:Hg19::chr15:40675222..40675233,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=90417 | |EntrezGene=90417 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30767 | |HGNC=30767 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=17bp_to_ENST00000560673_5end | |association_with_transcript=17bp_to_ENST00000560673_5end | ||
|cluster_id=chr15:40675222..40675233,+ | |||
|coexpression_cluster_id=C113 | |||
|description=CAGE_peak_4_at_C15orf23_5end | |description=CAGE_peak_4_at_C15orf23_5end | ||
|id=chr15:40675222..40675233,+ | |id=chr15:40675222..40675233,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000515;2.64e-38;3!CL:0000319;9.98e-30;1!CL:0002591;2.37e-29;1!CL:0000056;4.86e-29;4!CL:0000680;4.36e-17;7!CL:0000159;1.33e-15;2!CL:0002321;1.65e-08;15!CL:1000306;2.26e-08;4!CL:0002547;2.26e-08;4!CL:0002537;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000319,9.99e-30,1;CL:0002591,1.33e-29,1;CL:0000515,5.61e-29,4;CL:0000159,1.33e-15,2;CL:1000306,2.26e-08,4;CL:0002547,2.26e-08,4;CL:0002537,6.39e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000515;4.86e-29;4!UBERON:0007123;4.79e-07;5 | |||
|ontology_enrichment_disease=DOID:14566!2.58e-15!239;DOID:162!5.53e-15!235;DOID:0050687!6.28e-13!143;DOID:305!1.03e-12!106 | |ontology_enrichment_disease=DOID:14566!2.58e-15!239;DOID:162!5.53e-15!235;DOID:0050687!6.28e-13!143;DOID:305!1.03e-12!106 | ||
|ontology_enrichment_disease_v019=DOID:3030;9.98e-30;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,9.99e-30,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.60e-11!9 | |ontology_enrichment_uberon=UBERON:0001737!4.60e-11!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0000078;2.05e-15;2!UBERON:0002012;2.05e-15;2!UBERON:0008886;2.05e-15;2!UBERON:0004797;2.26e-08;4!UBERON:0000415;2.26e-08;4!UBERON:0007240;2.26e-08;4!UBERON:0005742;2.26e-08;4!UBERON:0005734;2.26e-08;4!UBERON:0004664;2.26e-08;4!UBERON:0004663;2.26e-08;4!UBERON:0001134;4.91e-08;16!UBERON:0002036;4.91e-08;16!UBERON:0002046;4.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000078,1.54e-15,2;UBERON:0007497,1.54e-15,2;UBERON:0003643,1.54e-15,2;UBERON:0003504,1.54e-15,2;UBERON:0003469,1.54e-15,2;UBERON:0003496,1.54e-15,2;UBERON:0002012,1.54e-15,2;UBERON:0008886,1.54e-15,2;UBERON:0007303,1.54e-15,2;UBERON:0002061,1.54e-15,2;UBERON:0005432,1.54e-15,2;UBERON:0004363,1.54e-15,2;UBERON:0009722,2.18e-11,11;UBERON:0007690,2.18e-11,11;UBERON:0004145,8.17e-11,3;UBERON:0000415,2.26e-08,4;UBERON:0007240,2.26e-08,4;UBERON:0005742,2.26e-08,4;UBERON:0005734,2.26e-08,4;UBERON:0004664,2.26e-08,4;UBERON:0004663,2.26e-08,4;UBERON:0008814,2.52e-07,18;UBERON:0002046,4.79e-07,5;UBERON:0004117,4.79e-07,5;UBERON:0007689,4.79e-07,5;UBERON:0007123,4.79e-07,5;UBERON:0003091,4.79e-07,5;UBERON:0003498,5.38e-07,5;UBERON:0005985,5.38e-07,5 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0,0,0,0.0945348171640679,0,0.175669571386252,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0.286836620748814,1.06400514659507,0,0,0.49333509683432,0,0.134710672069688,0.163461903113459,0,0,0.234321431833797,0,0,0,0.117434498643765,0,0.140450806702248,0,0,0.103325781175765,0,0,0,0,0.336672227908132,0.125118519871964,0.277064115484183,0,0,0,0.113432183160021,0.179389635688862,0,0,0.600182192168805,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0,0.355009592516614,0.302256294682921,0.67824236924195,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0.721879481669586,0.354920400119532,0.337169380156203,0.241011029883482,0.882351781859152,0.871517776369625,0.474541238222193,0.269662616320329,0.588664395376038,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.109750285408626,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,1.04007436911366,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,1.01346914667305,0,1.07436577943937,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256278298511402,0,0,0,0.154209693802656,0,0.246381468041427,0.519254429183621,0,0,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0.261435451024901,0.256450125116389,0,0,0,0.0915694648183434,0.165018999841176,0,0,0,0.096670718292122,0,0,0.137836572484531,0.214840489736547,0.290033387828457,0.255679882248303,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0.372158369359667,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0.421258456238981,0,0,0,0,0.141405431953713,1.13008116620243,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.211107635297664,0,0,0,0.0962221127255121,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0.962479855263359,0,0.185803175125719,0,0.426851060090485,0,0.199579371432817,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0.307240764308458,0.447352215784832,0,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0.242721043499027,0.111443384277478,0,0,0.296964680832639,0,0,0,0,0.16480387422676,0,0,0,0,0.102268682502155,0.123084805461069,0,0.269605053441981,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0.508507300585533,0.472775363535873,0,0,0.173624994933292,0,0,0,0.110579259931225,0,0,0.21787692703798,0.278847488557207,0,0,0.23056390438806,0,0.108647371922008,0,0,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0.816164040795739,0.141353071433941,0.216388639742091,0,0,0,0.296521128680622,0,0,0,0,0,0.182454789215666,0.19566461893209,0.728341138602278,0,0,0,0,0.150323419414493,0,0,0,0,0,0.284609546029793,0.138674673013139,0,0.195984794828755,0.174118413160805,0,0.343972064943233,0.290268993867255,0.146178634172371,0.410577285266046,0,0,0,0.137041924646751,0.19871461170299,0,0.391102765469606,0,0,0,0,0.343609788497747,0.171594997861965,0,0.124252535565433,0,0.135904206073614,0.313808538937,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0.157566364614447,0.0824158583811665,0.0674035438541849,0,0,0,0,0.160753148465019,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0,0,0,0,0,0,0,0,0.489473409012935,0,0.308801447160972,0,0,0.192914038270915,0.168942440653073,0,0,0.607719912354764,0,0,0,0,0,3.44082072255207,0.211312123358627,0,0.640150378164845,0.344429959321631,0,0.184105950251841,0,0,0,0.107824811396682,0,0,0,0,0,0,0.318004350653419,0.157723490002507,0,0,0.3062454773532,0,0,0,0,0,0,0,0,0,0,0.366857197043358,0,0.381382095467167,0,0,0,0.20170506870352,0,0,0,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0.171488009437418,0,0,0.354581522651905,0.333694205676207,0,0,0,0,0,0,0,0.158013611732727,0.116241425368125,0.173858272302579,0,0.414432328326074,0,0,0,0.236664001461131,0.170426809518315,0,0,0,0.955538938977433,0,0.098150233615243,0,0,0,0,0,0.233939463462106,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0.26721740526556,0.0918948995348449,0,0.454672189309436,0,0,0,0,0,0,0,0.560659312903067,8.21048341788327,0,0,0,0,0,0,0.0814032686109745,0.320182037633146,0,0,0,0,0,0,0,0 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| ||
|short_description=p4@C15orf23 | |short_description=p4@C15orf23 | ||
}} | }} |
Latest revision as of 13:17, 17 September 2015
Short description: | p4@C15orf23 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C15orf23_5end |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | 17bp_to_ENST00000560673_5end |
EntrezGene: | C15orf23 |
HGNC: | 30767 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucus secreting cell | 9.99e-30 | 1 |
smooth muscle cell of the pulmonary artery | 1.33e-29 | 1 |
skeletal muscle myoblast | 5.61e-29 | 4 |
seromucus secreting cell | 1.33e-15 | 2 |
fibroblast of tunica adventitia of artery | 2.26e-08 | 4 |
fibroblast of the aortic adventitia | 2.26e-08 | 4 |
amnion mesenchymal stem cell | 6.39e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mixed ectoderm/mesoderm/endoderm-derived structure | 1.54e-15 | 2 |
developing epithelial placode | 1.54e-15 | 2 |
respiratory system arterial blood vessel | 1.54e-15 | 2 |
respiratory system blood vessel | 1.54e-15 | 2 |
respiratory system artery | 1.54e-15 | 2 |
head blood vessel | 1.54e-15 | 2 |
pulmonary artery | 1.54e-15 | 2 |
pulmonary vascular system | 1.54e-15 | 2 |
pharyngeal vasculature | 1.54e-15 | 2 |
truncus arteriosus | 1.54e-15 | 2 |
aortic sac | 1.54e-15 | 2 |
pharyngeal arch artery | 1.54e-15 | 2 |
entire pharyngeal arch endoderm | 2.18e-11 | 11 |
early pharyngeal endoderm | 2.18e-11 | 11 |
outflow tract | 8.17e-11 | 3 |
artery wall | 2.26e-08 | 4 |
tunica adventitia of artery | 2.26e-08 | 4 |
adventitia | 2.26e-08 | 4 |
tunica adventitia of blood vessel | 2.26e-08 | 4 |
aorta tunica adventitia | 2.26e-08 | 4 |
aorta wall | 2.26e-08 | 4 |
pharyngeal arch system | 2.52e-07 | 18 |
thyroid gland | 4.79e-07 | 5 |
pharyngeal pouch | 4.79e-07 | 5 |
thyroid diverticulum | 4.79e-07 | 5 |
pharyngeal pouch 2 | 4.79e-07 | 5 |
thyroid primordium | 4.79e-07 | 5 |
heart blood vessel | 5.38e-07 | 5 |
coronary vessel | 5.38e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 9.99e-30 | 1 |