FFCP PHASE1:Hg19::chr1:35656397..35656455,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6421 | |EntrezGene=6421 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10774 | |HGNC=10774 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-203bp_to_uc001byr.2_5end | |association_with_transcript=-203bp_to_uc001byr.2_5end | ||
|cluster_id=chr1:35656397..35656455,- | |||
|coexpression_cluster_id=C1857 | |||
|description=CAGE_peak_3_at_SFPQ_5end | |description=CAGE_peak_3_at_SFPQ_5end | ||
|id=chr1:35656397..35656455,- | |id=chr1:35656397..35656455,- | ||
|ontology_enrichment_celltype=CL:0000860!1.07e-08!45;CL:0002057!4.07e-08!42 | |ontology_enrichment_celltype=CL:0000860!1.07e-08!45;CL:0002057!4.07e-08!42 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.64e-11;33!CL:0002057;7.64e-11;33!CL:0000473;4.83e-07;39!CL:0000234;4.83e-07;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.67e-09,42;CL:0002057,5.67e-09,42;CL:0002032,1.66e-07,161;CL:0000837,1.66e-07,161;CL:0002087,2.85e-07,115;CL:0000473,4.00e-07,48;CL:0000234,4.00e-07,48 | |||
|ontology_enrichment_development_v019=CL:0002057;4.53e-07;42 | |||
|ontology_enrichment_disease=DOID:162!1.55e-17!235;DOID:14566!9.58e-17!239;DOID:2531!1.66e-09!51;DOID:0060083!1.66e-09!51;DOID:0050687!7.08e-08!143;DOID:1240!7.36e-08!39;DOID:0050686!1.51e-07!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;9.09e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:162,7.05e-16,235;DOID:14566,6.68e-15,239;DOID:2531,3.58e-10,51;DOID:0060083,3.58e-10,51;DOID:1240,1.04e-08,39;DOID:0050686,4.92e-07,137 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@SFPQ | |short_description=p3@SFPQ | ||
}} | }} |
Latest revision as of 18:26, 17 September 2015
Short description: | p3@SFPQ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SFPQ_5end |
Coexpression cluster: | C1857_CD14_acute_CD4_diffuse_CD8_medulloblastoma_Neutrophils |
Association with transcript: | -203bp_to_uc001byr.2_5end |
EntrezGene: | SFPQ |
HGNC: | 10774 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.67e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.67e-09 | 42 |
hematopoietic oligopotent progenitor cell | 1.66e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.66e-07 | 161 |
nongranular leukocyte | 2.85e-07 | 115 |
defensive cell | 4.00e-07 | 48 |
phagocyte | 4.00e-07 | 48 |
Ontology term | p-value | n |
---|---|---|
cancer | 7.05e-16 | 235 |
disease of cellular proliferation | 6.68e-15 | 239 |
hematologic cancer | 3.58e-10 | 51 |
immune system cancer | 3.58e-10 | 51 |
leukemia | 1.04e-08 | 39 |
organ system cancer | 4.92e-07 | 137 |