FFCP PHASE1:Hg19::chr1:3591887..3591902,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:3591887..3591902,+ | |||
|description=CAGE_peak_at_chr1:3591887..3591902,+ | |description=CAGE_peak_at_chr1:3591887..3591902,+ | ||
|id=chr1:3591887..3591902,+ | |id=chr1:3591887..3591902,+ | ||
|ontology_enrichment_celltype=CL:0000039!2.13e-13!7;CL:0000586!2.13e-13!7;CL:0000066!4.39e-13!254;CL:0002076!2.61e-12!43;CL:0002322!8.30e-12!5;CL:0002251!9.83e-10!21;CL:0000223!1.01e-08!59;CL:0002166!3.63e-07!3;CL:0002159!4.39e-07!13 | |ontology_enrichment_celltype=CL:0000039!2.13e-13!7;CL:0000586!2.13e-13!7;CL:0000066!4.39e-13!254;CL:0002076!2.61e-12!43;CL:0002322!8.30e-12!5;CL:0002251!9.83e-10!21;CL:0000223!1.01e-08!59;CL:0002166!3.63e-07!3;CL:0002159!4.39e-07!13 | ||
|ontology_enrichment_celltype_v019=CL:0002322;2.25e-22;5!CL:0002537;1.27e-12;5!CL:0000540;7.76e-11;6!CL:0000404;7.76e-11;6!CL:0002166;7.17e-10;3!CL:0000313;1.84e-08;1!CL:0002336;2.27e-08;1!CL:0002261;2.27e-08;1!CL:0002170;2.27e-08;1!CL:0002252;7.33e-08;1!CL:0002321;1.51e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.44e-22,5;CL:0002537,1.85e-12,5;CL:0000540,7.90e-11,6;CL:0000031,7.90e-11,6;CL:0000404,7.90e-11,6;CL:0002166,6.28e-10,3;CL:0000313,1.91e-08,1;CL:0002336,2.35e-08,1;CL:0002261,2.35e-08,1;CL:0002170,2.35e-08,1;CL:0000047,3.08e-08,8;CL:0002252,5.40e-08,1 | |||
|ontology_enrichment_development_v019=CL:0000031;7.76e-11;6 | |||
|ontology_enrichment_disease=DOID:1749!3.69e-10!14;DOID:305!1.01e-09!106;DOID:0050687!1.13e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.84e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,1.91e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0000344!9.28e-12!12;UBERON:0004119!2.55e-11!169;UBERON:0000925!2.55e-11!169;UBERON:0006595!2.55e-11!169;UBERON:0003729!1.65e-10!5;UBERON:0000974!8.82e-09!10;UBERON:0003343!2.13e-08!4;UBERON:0004785!2.13e-08!4;UBERON:0005631!2.59e-08!14;UBERON:0000158!2.59e-08!14;UBERON:0005911!3.02e-08!82;UBERON:0001007!2.58e-07!155;UBERON:0001555!2.58e-07!155;UBERON:0007026!2.58e-07!155;UBERON:0000365!6.82e-07!5;UBERON:0004923!7.35e-07!57 | |||
|ontology_enrichment_uberon_v019=UBERON:0000305;3.68e-09;7!UBERON:0004911;1.84e-08;1!UBERON:0001708;1.30e-07;4!UBERON:0008895;1.30e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000305,4.81e-09,7;UBERON:0004911,1.91e-08,1;UBERON:0004871,5.68e-08,8;UBERON:0005631,1.01e-07,14;UBERON:0000158,1.01e-07,14;UBERON:0001708,1.18e-07,4;UBERON:0008895,1.18e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.982935746006035,1.39560233594486,0,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0.741568885568859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74437620857014,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386521706326594,1.90922284413584,0,2.43947412259191,5.16866096453793,3.137236457477,0.621966330092223,2.01856680700503,1.82488679537915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.329250856225877,0,0,4.90718759340207,0,0,0,0,0,0,0,0,0,0,0,0,0,2.81201501960331,0.16798212819886,1.55952606966625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.66435439510497,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40101294060657,0.276242966807689,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0.765676274967505,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68471475667626,0.886860307073351,0.689170200620878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,1.18785872333055,4.91457123358771,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0.699679999969566,0,0.341380344856499,3.0510438035132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23056390438806,0.179515288819544,0.54323685961004,0.31900115973192,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0.816164040795739,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0,0,0,0,0,0,0,0.569219092059585,0,0,0.587954384486266,0,0,0,0,0,0,0.775912131907355,0,0,0,0,0,0.195551382734803,0.0801588202515337,0,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8814803596864,0,0,0,0.599037001496973,0,0,0,0,1.16495949527454,0,0,0,0,0,0,0,2.08979093004525,2.33817042215297,2.49264202817511,0,0,0,0,0,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0.414239055347196,0,0,0.852548188666271,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.44921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87034029507179,0.235939446695481,0.183428598521679,0.231051332300676,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333694205676207,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.26390418067637,0.785201868921944,0.121917924982269,0,0,0,0.485710993059139,0.233939463462106,0,0,0.11294608203896,0,0,0,0,0,0,0.471353094203252,0,0,0,0,0,0,0.299823467774787,1.78553938605658,0,0.0802413666891683,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,1.60330443159336,0.643264296743914,1.0028301571695,0,0,0,0,0,0.952257725854961,0.0645889098360061,0.186224142887574,0,0.190941474834495,1.21270313374932,0,0,0.202056159043763,0.143444410785353,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 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| ||
|short_description=p@chr1:3591887..3591902,+ | |short_description=p@chr1:3591887..3591902,+ | ||
}} | }} |
Latest revision as of 07:38, 28 July 2015
Short description: | p@chr1:3591887..3591902, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:3591887..3591902, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.44e-22 | 5 |
amnion mesenchymal stem cell | 1.85e-12 | 5 |
neuron | 7.90e-11 | 6 |
neuroblast | 7.90e-11 | 6 |
electrically signaling cell | 7.90e-11 | 6 |
epithelial cell of Malassez | 6.28e-10 | 3 |
serous secreting cell | 1.91e-08 | 1 |
buccal mucosa cell | 2.35e-08 | 1 |
endothelial cell of viscerocranial mucosa | 2.35e-08 | 1 |
keratinized cell of the oral mucosa | 2.35e-08 | 1 |
neuronal stem cell | 3.08e-08 | 8 |
epithelial cell of esophagus | 5.40e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
amnion | 4.81e-09 | 7 |
epithelium of female gonad | 1.91e-08 | 1 |
somatic layer of lateral plate mesoderm | 5.68e-08 | 8 |
extraembryonic membrane | 1.01e-07 | 14 |
membranous layer | 1.01e-07 | 14 |
jaw skeleton | 1.18e-07 | 4 |
splanchnocranium | 1.18e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 1.91e-08 | 1 |