FFCP PHASE1:Hg19::chr21:31852683..31852688,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=337882 | |EntrezGene=337882 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18936 | |HGNC=18936 | ||
|TSSclassifier=strong | |||
|UniProt=Q8IUB9 | |UniProt=Q8IUB9 | ||
|association_with_transcript=-20bp_to_ENST00000390689_5end | |association_with_transcript=-20bp_to_ENST00000390689_5end | ||
|cluster_id=chr21:31852683..31852688,- | |||
|coexpression_cluster_id=C208 | |||
|description=CAGE_peak_1_at_KRTAP19-1_5end | |description=CAGE_peak_1_at_KRTAP19-1_5end | ||
|id=chr21:31852683..31852688,- | |id=chr21:31852683..31852688,- | ||
|ontology_enrichment_celltype=CL:0002077!8.57e-18!33;CL:0000148!6.52e-17!10;CL:0000541!6.52e-17!10;CL:0002567!2.45e-15!3;CL:0002159!6.00e-12!13;CL:0000147!6.92e-12!14;CL:0000362!3.73e-09!8;CL:0000312!1.41e-08!5;CL:0000325!3.69e-08!39;CL:0000710!4.12e-08!20;CL:0000240!3.24e-07!6;CL:0000311!3.24e-07!6;CL:0000079!3.24e-07!6;CL:0000237!3.24e-07!6;CL:0000036!3.24e-07!6;CL:0000357!3.24e-07!6;CL:0000114!3.24e-07!6;CL:0002328!3.59e-07!3;CL:0002166!5.16e-07!3;CL:0002621!7.83e-07!3;CL:0002231!8.07e-07!3 | |ontology_enrichment_celltype=CL:0002077!8.57e-18!33;CL:0000148!6.52e-17!10;CL:0000541!6.52e-17!10;CL:0002567!2.45e-15!3;CL:0002159!6.00e-12!13;CL:0000147!6.92e-12!14;CL:0000362!3.73e-09!8;CL:0000312!1.41e-08!5;CL:0000325!3.69e-08!39;CL:0000710!4.12e-08!20;CL:0000240!3.24e-07!6;CL:0000311!3.24e-07!6;CL:0000079!3.24e-07!6;CL:0000237!3.24e-07!6;CL:0000036!3.24e-07!6;CL:0000357!3.24e-07!6;CL:0000114!3.24e-07!6;CL:0002328!3.59e-07!3;CL:0002166!5.16e-07!3;CL:0002621!7.83e-07!3;CL:0002231!8.07e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.03e-46;3!CL:0000148;1.55e-38;10!CL:0000147;1.37e-27;14!CL:0000710;2.35e-19;20!CL:0002566;8.19e-17;1!CL:0002077;1.01e-14;34!CL:0000075;2.33e-14;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.03e-46,3;CL:0000148,1.49e-38,10;CL:0000541,1.49e-38,10;CL:0000147,1.34e-27,14;CL:0000710,2.30e-19,20;CL:0002566,7.57e-17,1;CL:0002077,4.05e-16,34;CL:0000075,2.30e-14,27;CL:0000333,5.06e-09,41;CL:0000221,2.87e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.31e-16;1 | |||
|ontology_enrichment_disease=DOID:1909!1.39e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:1909;4.04e-31;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,4.71e-31,2 | |||
|ontology_enrichment_uberon=UBERON:0001003!2.50e-15!14;UBERON:0007376!2.50e-15!14;UBERON:0007383!2.50e-15!14;UBERON:0004815!3.59e-07!3;UBERON:0002031!3.59e-07!3;UBERON:0001949!7.83e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0007029;4.72e-17;1!UBERON:0001003;8.15e-10;15!UBERON:0007376;8.15e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007029,4.72e-17,1;UBERON:0001003,8.40e-10,15;UBERON:0007376,8.40e-10,15;UBERON:0007383,8.40e-10,15 | |||
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| ||
|short_description=p1@KRTAP19-1 | |short_description=p1@KRTAP19-1 | ||
}} | }} |
Latest revision as of 02:03, 18 September 2015
Short description: | p1@KRTAP19-1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRTAP19-1_5end |
Coexpression cluster: | C208_skin_amniotic_papillotubular_salivary_umbilical_Alveolar_serous |
Association with transcript: | -20bp_to_ENST00000390689_5end |
EntrezGene: | KRTAP19-1 |
HGNC: | 18936 |
UniProt: | Q8IUB9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.03e-46 | 3 |
melanocyte | 1.49e-38 | 10 |
melanoblast | 1.49e-38 | 10 |
pigment cell | 1.34e-27 | 14 |
neurecto-epithelial cell | 2.30e-19 | 20 |
dark melanocyte | 7.57e-17 | 1 |
ecto-epithelial cell | 4.05e-16 | 34 |
columnar/cuboidal epithelial cell | 2.30e-14 | 27 |
migratory neural crest cell | 5.06e-09 | 41 |
ectodermal cell | 2.87e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
surface | 4.72e-17 | 1 |
skin epidermis | 8.40e-10 | 15 |
outer epithelium | 8.40e-10 | 15 |
enveloping layer of ectoderm | 8.40e-10 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 4.71e-31 | 2 |