FFCP PHASE1:Hg19::chr17:39657569..39657633,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:39657569..39657633,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr17:39657569..39657633,- | |description=CAGE_peak_at_chr17:39657569..39657633,- | ||
|id=chr17:39657569..39657633,- | |id=chr17:39657569..39657633,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;3.74e-10;1!UBERON:0004874;1.83e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3151;8.17e-10;1!DOID:3149;8.17e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,8.17e-10,1;DOID:3149,8.17e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0000161!2.68e-14!35;UBERON:0000974!3.85e-12!10;UBERON:0006562!2.16e-11!11;UBERON:0004119!4.17e-10!169;UBERON:0000925!4.17e-10!169;UBERON:0006595!4.17e-10!169;UBERON:0005156!5.38e-10!59;UBERON:0000990!5.38e-10!59;UBERON:0001042!5.19e-09!10;UBERON:0009145!5.19e-09!10;UBERON:0001004!9.57e-09!72;UBERON:0003127!1.03e-08!2;UBERON:0000341!1.86e-08!2;UBERON:0000162!2.08e-08!14;UBERON:0001353!2.08e-08!14;UBERON:0000163!2.08e-08!14;UBERON:0006866!2.08e-08!14;UBERON:0000164!2.08e-08!14;UBERON:0000931!2.08e-08!14;UBERON:0003133!4.02e-08!48;UBERON:0001255!6.53e-08!2;UBERON:0001556!6.53e-08!2;UBERON:0004175!7.91e-08!25;UBERON:0004122!8.37e-08!15;UBERON:0000077!1.01e-07!130;UBERON:0000166!1.40e-07!21;UBERON:0003064!1.59e-07!37;UBERON:0005795!3.70e-07!22;UBERON:0001007!3.87e-07!155;UBERON:0001555!3.87e-07!155;UBERON:0007026!3.87e-07!155;UBERON:0000065!4.42e-07!53;UBERON:0003975!4.48e-07!22;UBERON:0003101!7.58e-07!22;UBERON:0000079!7.58e-07!22;UBERON:0007023!9.41e-07!115 | |ontology_enrichment_uberon=UBERON:0000161!2.68e-14!35;UBERON:0000974!3.85e-12!10;UBERON:0006562!2.16e-11!11;UBERON:0004119!4.17e-10!169;UBERON:0000925!4.17e-10!169;UBERON:0006595!4.17e-10!169;UBERON:0005156!5.38e-10!59;UBERON:0000990!5.38e-10!59;UBERON:0001042!5.19e-09!10;UBERON:0009145!5.19e-09!10;UBERON:0001004!9.57e-09!72;UBERON:0003127!1.03e-08!2;UBERON:0000341!1.86e-08!2;UBERON:0000162!2.08e-08!14;UBERON:0001353!2.08e-08!14;UBERON:0000163!2.08e-08!14;UBERON:0006866!2.08e-08!14;UBERON:0000164!2.08e-08!14;UBERON:0000931!2.08e-08!14;UBERON:0003133!4.02e-08!48;UBERON:0001255!6.53e-08!2;UBERON:0001556!6.53e-08!2;UBERON:0004175!7.91e-08!25;UBERON:0004122!8.37e-08!15;UBERON:0000077!1.01e-07!130;UBERON:0000166!1.40e-07!21;UBERON:0003064!1.59e-07!37;UBERON:0005795!3.70e-07!22;UBERON:0001007!3.87e-07!155;UBERON:0001555!3.87e-07!155;UBERON:0007026!3.87e-07!155;UBERON:0000065!4.42e-07!53;UBERON:0003975!4.48e-07!22;UBERON:0003101!7.58e-07!22;UBERON:0000079!7.58e-07!22;UBERON:0007023!9.41e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;6.82e-18;2!UBERON:0001723;1.53e-12;3!UBERON:0001033;1.53e-12;3!UBERON:0005795;6.88e-10;1!UBERON:0002372;7.50e-10;1!UBERON:0001961;7.50e-10;1!UBERON:0001744;7.50e-10;1!UBERON:0001042;7.50e-10;1!UBERON:0001735;7.50e-10;1!UBERON:0006834;1.83e-09;1!UBERON:0000989;1.83e-09;1!UBERON:0000997;1.83e-09;1!UBERON:0008811;1.83e-09;1!UBERON:0005056;1.83e-09;1!UBERON:0004176;1.83e-09;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,6.27e-18,2;UBERON:0001723,1.53e-12,3;UBERON:0001033,1.53e-12,3;UBERON:0010056,1.53e-12,3;UBERON:0002372,7.50e-10,1;UBERON:0001961,7.50e-10,1;UBERON:0001744,7.50e-10,1;UBERON:0001735,7.50e-10,1;UBERON:0000997,1.25e-09,1;UBERON:0005056,1.25e-09,1;UBERON:0006834,1.48e-09,1;UBERON:0000989,1.76e-09,1;UBERON:0008811,1.76e-09,1;UBERON:0006258,1.76e-09,1;UBERON:0005876,1.76e-09,1;UBERON:0004874,1.76e-09,1;UBERON:0001042,2.64e-08,10;UBERON:0009145,2.64e-08,10;UBERON:0006562,1.37e-07,11 | |||
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| ||
|short_description=p@chr17:39657569..39657633,- | |short_description=p@chr17:39657569..39657633,- | ||
}} | }} |
Latest revision as of 16:40, 25 July 2015
Short description: | p@chr17:39657569..39657633, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:39657569..39657633, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 6.27e-18 | 2 |
tongue | 1.53e-12 | 3 |
gustatory system | 1.53e-12 | 3 |
future tongue | 1.53e-12 | 3 |
tonsil | 7.50e-10 | 1 |
mucosa-associated lymphoid tissue | 7.50e-10 | 1 |
lymphoid tissue | 7.50e-10 | 1 |
tonsillar ring | 7.50e-10 | 1 |
mammalian vulva | 1.25e-09 | 1 |
external female genitalia | 1.25e-09 | 1 |
uterus or analog | 1.48e-09 | 1 |
penis | 1.76e-09 | 1 |
intromittent organ | 1.76e-09 | 1 |
lateral plate mesenchyme | 1.76e-09 | 1 |
undifferentiated genital tubercle | 1.76e-09 | 1 |
somatopleure | 1.76e-09 | 1 |
chordate pharynx | 2.64e-08 | 10 |
pharyngeal region of foregut | 2.64e-08 | 10 |
pharynx | 1.37e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 8.17e-10 | 1 |
keratoacanthoma | 8.17e-10 | 1 |