FFCP PHASE1:Hg19::chr17:46783984..46784023,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:46783984..46784023,+ | |||
|coexpression_cluster_id=C165 | |||
|description=CAGE_peak_at_chr17:46783984..46784023,+ | |description=CAGE_peak_at_chr17:46783984..46784023,+ | ||
|id=chr17:46783984..46784023,+ | |id=chr17:46783984..46784023,+ | ||
|ontology_enrichment_celltype=CL:0002579!1.58e-08!3;CL:0002615!2.56e-08!3;CL:0002334!9.13e-07!12 | |ontology_enrichment_celltype=CL:0002579!1.58e-08!3;CL:0002615!2.56e-08!3;CL:0002334!9.13e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:0002579;4.58e-25;3!CL:1000497;3.67e-10;17!CL:0002518;3.67e-10;17!CL:0002615;2.19e-07;3!CL:0002334;5.55e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0002579,4.31e-25,3;CL:1000497,3.44e-10,17;CL:0002518,3.44e-10,17;CL:0002615,2.32e-07,3;CL:0002334,5.47e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0000358;1.56e-19;1 | |||
|ontology_enrichment_disease=DOID:0050687!3.71e-08!143;DOID:305!4.10e-07!106 | |ontology_enrichment_disease=DOID:0050687!3.71e-08!143;DOID:305!4.10e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:6193;8.94e-20;1!DOID:3350;1.43e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,8.95e-20,1;DOID:3350,1.43e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0003688!3.67e-15!6;UBERON:0002358!3.67e-15!6;UBERON:0003684!3.67e-15!6;UBERON:0001178!3.67e-15!6;UBERON:0002417!6.96e-10!61;UBERON:0000916!6.96e-10!61;UBERON:0004457!3.50e-09!12;UBERON:0000042!3.50e-09!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;8.92e-28;6!UBERON:0002358;8.92e-28;6!UBERON:0003684;8.92e-28;6!UBERON:0001178;8.92e-28;6!UBERON:0004457;8.93e-19;9!UBERON:0000042;8.93e-19;9!UBERON:0001155;6.61e-09;9!UBERON:0000059;1.90e-07;11!UBERON:0002113;2.30e-07;24!UBERON:0011143;2.30e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.34e-28,6;UBERON:0002358,9.34e-28,6;UBERON:0003684,9.34e-28,6;UBERON:0001178,9.34e-28,6;UBERON:0004457,3.01e-14,12;UBERON:0000042,3.01e-14,12;UBERON:0002417,1.02e-10,60;UBERON:0000916,1.02e-10,60;UBERON:0001155,6.61e-09,9;UBERON:0000059,1.90e-07,11;UBERON:0002113,7.41e-07,26;UBERON:0003918,7.41e-07,26;UBERON:0011143,7.41e-07,26;UBERON:0005095,7.41e-07,26;UBERON:0007687,7.41e-07,26 | |||
|phase1_expression=0,0,0.563817616383885,2.00146596706261,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.337552664482532,0.876933046450788,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.197030760201927,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.767309866440312,0.280660094433074,0.512556597022804,3.07024349440022,1.44768529029247,0,0,0.177561725313127,0,0,0,0,0.200506470303285,0,0,0,0,0,0.385076685522074,0,0,2.42768746453614,0,0,0,1.54227252690289,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,1.99052386215701,0,1.22206028986725,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0.554698692052555,0,0.195984794828755,0,0.17472666824203,10.8351200457118,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0.114536596165916,0,0,0.372757606696298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0.76872455576384,0,0,0,0,0,0,0.655219697692825,0,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0.560544326627578,0.913158720509496,0,1.43325506366115,0,0,0.348724276104376,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182037633146,0,0.0898252021065869,2.34640942403454,0,0,0,0,0 | |phase1_expression=0,0,0.563817616383885,2.00146596706261,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157421562627358,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0.113309342697566,0,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0,0,0.201606743224732,0,0.144824403882799,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103052529238439,0,0,0.337552664482532,0.876933046450788,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0.217879444092406,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336255431980582,0.197030760201927,0,0,0,0,0,0,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0.767309866440312,0.280660094433074,0.512556597022804,3.07024349440022,1.44768529029247,0,0,0.177561725313127,0,0,0,0,0.200506470303285,0,0,0,0,0,0.385076685522074,0,0,2.42768746453614,0,0,0,1.54227252690289,0,0,0.254876273045038,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0.213648142254946,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0.557694977114413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,1.99052386215701,0,1.22206028986725,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0.554698692052555,0,0.195984794828755,0,0.17472666824203,10.8351200457118,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0.19980960958213,0,0.114536596165916,0,0,0.372757606696298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0.0984274815147488,0,0,0,0,0.137539436597234,0,0,0,0,0,0.157611414598396,0.104909176269996,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470531639396343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0.76872455576384,0,0,0,0,0,0,0.655219697692825,0,0.633936370075881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.231051332300676,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.460935950223117,0,0,0,0,0,0,0,0.560544326627578,0.913158720509496,0,1.43325506366115,0,0,0.348724276104376,0.173858272302579,0,0,0,0,0,0,0,0,0.22910686854405,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0.11294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320182037633146,0,0.0898252021065869,2.34640942403454,0,0,0,0,0 | ||
|short_description=p@chr17:46783984..46784023,+ | |short_description=p@chr17:46783984..46784023,+ | ||
}} | }} |
Latest revision as of 18:13, 25 July 2015
Short description: | p@chr17:46783984..46784023, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:46783984..46784023, + |
Coexpression cluster: | C165_epithelioid_Adipocyte_mesothelioma_myxofibrosarcoma_lung_gastric_Mesothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
omentum preadipocyte | 4.31e-25 | 3 |
kidney cell | 3.44e-10 | 17 |
kidney epithelial cell | 3.44e-10 | 17 |
adipocyte of omentum tissue | 2.32e-07 | 3 |
preadipocyte | 5.47e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.34e-28 | 6 |
peritoneum | 9.34e-28 | 6 |
abdominal cavity | 9.34e-28 | 6 |
visceral peritoneum | 9.34e-28 | 6 |
cavity lining | 3.01e-14 | 12 |
serous membrane | 3.01e-14 | 12 |
abdominal segment of trunk | 1.02e-10 | 60 |
abdomen | 1.02e-10 | 60 |
colon | 6.61e-09 | 9 |
large intestine | 1.90e-07 | 11 |
kidney | 7.41e-07 | 26 |
kidney mesenchyme | 7.41e-07 | 26 |
upper urinary tract | 7.41e-07 | 26 |
kidney rudiment | 7.41e-07 | 26 |
kidney field | 7.41e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 8.95e-20 | 1 |
mesenchymal cell neoplasm | 1.43e-10 | 2 |