FFCP PHASE1:Hg19::chr2:158114370..158114384,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11227 | |EntrezGene=11227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4127 | |HGNC=4127 | ||
|TSSclassifier=strong | |||
|UniProt=A5PKZ1,Q7Z7M9 | |UniProt=A5PKZ1,Q7Z7M9 | ||
|association_with_transcript=30bp_to_NM_014568,uc002tzg.2,uc010zci.1_5end | |association_with_transcript=30bp_to_NM_014568,uc002tzg.2,uc010zci.1_5end | ||
|cluster_id=chr2:158114370..158114384,+ | |||
|coexpression_cluster_id=C2663 | |||
|description=CAGE_peak_8_at_GALNT5_5end | |description=CAGE_peak_8_at_GALNT5_5end | ||
|id=chr2:158114370..158114384,+ | |id=chr2:158114370..158114384,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.07e-15!75;CL:0000055!5.09e-15!180;CL:0002620!5.34e-08!23 | |ontology_enrichment_celltype=CL:0000057!1.07e-15!75;CL:0000055!5.09e-15!180;CL:0002620!5.34e-08!23 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.12e-20;23!CL:0000057;1.20e-08;73!CL:0000764;1.75e-07;2!CL:0000558;1.75e-07;2!CL:1000306;4.49e-07;4!CL:0002547;4.49e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,6.64e-21,23;CL:0000057,5.85e-20,76;CL:0000764,1.66e-07,2;CL:0000765,1.66e-07,2;CL:0000050,1.66e-07,2;CL:0000038,1.66e-07,2;CL:0000558,1.66e-07,2;CL:0000547,1.66e-07,2;CL:0000549,1.66e-07,2;CL:0000550,1.66e-07,2;CL:0000552,1.66e-07,2;CL:1000306,3.10e-07,4;CL:0002547,3.10e-07,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;2.79e-14;5!DOID:450;2.79e-14;5!DOID:66;2.79e-14;5!DOID:423;2.79e-14;5!DOID:0080000;2.79e-14;5!DOID:11722;2.79e-14;5!DOID:1036;4.18e-13;8 | |||
|ontology_enrichment_disease_v019_2=DOID:17,1.92e-14,5;DOID:450,1.92e-14,5;DOID:66,1.92e-14,5;DOID:423,1.92e-14,5;DOID:0080000,1.92e-14,5;DOID:11722,1.92e-14,5;DOID:1036,4.59e-13,8 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.80e-12!95;UBERON:0000165!5.67e-11!28;UBERON:0000930!5.67e-11!28;UBERON:0000914!3.84e-08!83;UBERON:0002329!3.84e-08!83;UBERON:0003077!3.84e-08!83;UBERON:0003059!3.84e-08!83;UBERON:0007282!3.84e-08!83;UBERON:0009618!3.84e-08!83;UBERON:0007285!3.84e-08!83;UBERON:0000475!1.42e-07!365;UBERON:0000078!7.75e-07!18;UBERON:0000166!7.84e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;5.66e-12;41!UBERON:0002199;7.00e-10;46!UBERON:0002416;7.00e-10;46!UBERON:0004797;4.49e-07;4!UBERON:0000415;4.49e-07;4!UBERON:0007240;4.49e-07;4!UBERON:0005742;4.49e-07;4!UBERON:0005734;4.49e-07;4!UBERON:0004664;4.49e-07;4!UBERON:0004663;4.49e-07;4!UBERON:0003102;6.88e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,6.68e-16,41;UBERON:0002199,1.06e-13,46;UBERON:0002416,1.06e-13,46;UBERON:0003102,2.83e-10,99;UBERON:0000415,3.10e-07,4;UBERON:0007240,3.10e-07,4;UBERON:0005742,3.10e-07,4;UBERON:0005734,3.10e-07,4;UBERON:0004664,3.10e-07,4;UBERON:0004663,3.10e-07,4;UBERON:0004573,7.10e-07,33;UBERON:0004571,7.10e-07,33 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0.618831764800233,0.662794751455832,0.672325146451775,1.20538905604795,0,0,0,0,0,0.572471974262113,0,0,0,0,0,0,0,0,0.919421224478927,0,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.28769239232215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.579386075843295,0,0,0,0.443458794925128,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.993943903390637,0.506522046658319,10.5927344650575,1.72101972449288,1.41867352879343,0,1.06748995729705,0.49333509683432,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,1.83738754129404,0.122834317311768,0.619954687054593,3.56400857184616,0.741800787835671,0,0,0.336672227908132,0.125118519871964,0.831192346452549,1.75591048352335,1.5324389789951,2.25357088359895,0.567160915800105,1.61450672119976,1.49490172172997,1.27159140695737,4.50136644126603,2.67936576019941,1.28820270022815,1.48893485065272,4.89451363499672,1.65642908774038,1.26216887122057,1.84099797284599,1.45481451136931,2.84007674013291,1.10827308050404,0.339121184620975,0.386521706326594,0.545492241181669,0.286804595389004,0,0,0,0,0,0,1.56449532329816,0.643240938192885,0,0.464367928031979,2.88751792667834,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0.277765335475589,0,0,0,0,0.939269553886573,0,0,0,0,0,0,0,0,0,1.34385702559088,1.13420077793909,0,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0.239624855491583,0,0,1.01346914667305,0.61642896765115,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,0.271265023699736,0.623912584592421,1.24900292158013,1.26161932027148,0.468565659970853,0.300946099727719,0,0,0.664225598535437,0.553107505625109,1.39013783148933,0,0,0,0,0,0,0,0,0.992431231275107,1.53461973288062,0.561320188866147,0.256278298511402,0.511707249066704,0,0,0.154209693802656,0.177561725313127,1.23190734020714,0,0.348631135379878,0.120859449591622,0,0.460404944679482,0.803701137152247,0.182091168006717,0.655622074797121,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,8.55113518919145,4.96727356947311,0,0,0,0.309123034943167,0,0,0,0,0,0.193341436584244,0,0,0,0.107420244868274,0.290033387828457,0.0852266274161009,0,1.32227932288782,0.192190067365106,0.382838137483752,0,0,5.35180989612088,0,0,0.532306030317022,2.60979897622522,0.74129687641568,0.429374660225974,0,0.632758849437452,0.571890581771475,0.255897791311334,0,0,0,0.179872457583315,0,0.235624804691373,0.404364963146632,1.58510321173008,0,0.48763373908959,0.487426979262569,0,0,0.282810863907425,0,1.65409603063837,2.65375590096488,2.19225442626881,0,1.9676842561399,1.21746226177622,0,0,0.717056761020258,0,0,0,0.422215270595328,0.329294892959902,0,0,0.288666338176536,0,0,0.376575203107117,0,0,0,0.229723400206959,1.01489521846434,0.764637207142375,1.70894156152249,0,0.411362273086194,0.648473311192717,1.62009431171434,2.37937552888281,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.835218521685727,1.23087398947712,0,0,0,0.18714054040822,0,0,0.111443384277478,0,0.23874448473769,0,0.307160702099232,0,0,0,0,0,0,0,0,0.920418142519393,0,4.66559381492711,0.898683511473268,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,3.05163472634166,3.09621927807429,0.886642856860642,0.219385397153973,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0.997270091400938,5.63989151542952,5.09762589226123,4.86682602229944,2.65655225813859,1.27149263184303,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0.288180834308212,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,1.80149941771202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0.179287339332845,0,0,0,0,0,0.864221491201268,0,0,1.39557285273876,2.21504428321048,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.628817220398664,0,0,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.443716206147409,0.0620964029413835,0,0,0,0,0,0,0,0.298509605773748,0,0.554805861502613,0.757612021100357,0.50313580350515,1.77962244319307,0.228840068396924,0.604923695052956,0,0.295710299979268,0.159296767163702,0,0,1.24411862352257,0.265841714557995,1.04349012362347,0.300515217994437,0,0.406870733204662,0.363697318405119,0.537052785212442,0,0,0,0,0,0,0.192619830407303,0,0,0,1.15761237161917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.979156554036111,0.622077260032973,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,1.1441462864015,0,0,0,0,0,0,0,2.21784129325568,0,0,0,0,0,0.548257766857182,0,0,0.127762427639595,0.535701835878287,0,0,0.227662191351298,0,0,0.514464028312255,0,0,0,0,0,0,0,0,0.431855182437243,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| ||
|short_description=p8@GALNT5 | |short_description=p8@GALNT5 | ||
}} | }} |
Latest revision as of 17:02, 17 September 2015
Short description: | p8@GALNT5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_GALNT5_5end |
Coexpression cluster: | C2663_Fibroblast_Reticulocytes_Smooth_chronic_basal_cerebellum_liposarcoma |
Association with transcript: | 30bp_to_NM_014568, uc002tzg.2, uc010zci.1_5end |
EntrezGene: | GALNT5 |
HGNC: | 4127 |
UniProt: | A5PKZ1Q7Z7M9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 6.64e-21 | 23 |
fibroblast | 5.85e-20 | 76 |
erythroid lineage cell | 1.66e-07 | 2 |
erythroblast | 1.66e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 1.66e-07 | 2 |
erythroid progenitor cell | 1.66e-07 | 2 |
reticulocyte | 1.66e-07 | 2 |
proerythroblast | 1.66e-07 | 2 |
basophilic erythroblast | 1.66e-07 | 2 |
polychromatophilic erythroblast | 1.66e-07 | 2 |
orthochromatic erythroblast | 1.66e-07 | 2 |
fibroblast of tunica adventitia of artery | 3.10e-07 | 4 |
fibroblast of the aortic adventitia | 3.10e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin of body | 6.68e-16 | 41 |
integument | 1.06e-13 | 46 |
integumental system | 1.06e-13 | 46 |
surface structure | 2.83e-10 | 99 |
artery wall | 3.10e-07 | 4 |
tunica adventitia of artery | 3.10e-07 | 4 |
adventitia | 3.10e-07 | 4 |
tunica adventitia of blood vessel | 3.10e-07 | 4 |
aorta tunica adventitia | 3.10e-07 | 4 |
aorta wall | 3.10e-07 | 4 |
systemic artery | 7.10e-07 | 33 |
systemic arterial system | 7.10e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 1.92e-14 | 5 |
myotonic disease | 1.92e-14 | 5 |
muscle tissue disease | 1.92e-14 | 5 |
myopathy | 1.92e-14 | 5 |
muscular disease | 1.92e-14 | 5 |
myotonic dystrophy | 1.92e-14 | 5 |
chronic leukemia | 4.59e-13 | 8 |