FFCP PHASE1:Hg19::chr2:165650899..165650926,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:165650899..165650926,- | |||
|coexpression_cluster_id=C161 | |||
|description=CAGE_peak_at_chr2:165650899..165650926,- | |description=CAGE_peak_at_chr2:165650899..165650926,- | ||
|id=chr2:165650899..165650926,- | |id=chr2:165650899..165650926,- | ||
|ontology_enrichment_celltype=CL:0002231!2.38e-12!3;CL:0000077!9.65e-12!19;CL:0000511!1.98e-10!1;CL:0002625!1.98e-10!1;CL:0000216!1.98e-10!1 | |ontology_enrichment_celltype=CL:0002231!2.38e-12!3;CL:0000077!9.65e-12!19;CL:0000511!1.98e-10!1;CL:0002625!1.98e-10!1;CL:0000216!1.98e-10!1 | ||
|ontology_enrichment_celltype_v019=CL:0000511;2.21e-40;1!CL:0002625;2.21e-40;1!CL:0000216;2.21e-40;1!CL:0002097;3.11e-21;2!CL:0000077;1.39e-19;19!CL:0000174;1.22e-14;3!CL:0000154;6.78e-08;6!CL:0000076;1.63e-07;63 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.48e-40,1;CL:0002625,1.48e-40,1;CL:0000216,1.48e-40,1;CL:0002097,3.11e-21,2;CL:0000077,1.31e-19,19;CL:0000174,1.22e-14,3;CL:0000076,9.45e-11,63;CL:0000154,6.34e-08,6;CL:0000213,5.78e-07,58;CL:0000215,5.78e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3369!2.84e-10!1 | |||
|ontology_enrichment_disease_v019=DOID:4362;3.22e-09;5!DOID:170;5.54e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,3.22e-09,5;DOID:170,5.54e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0001136!1.98e-10!1;UBERON:0001343!1.98e-10!1;UBERON:0004910!1.98e-10!1;UBERON:0005154!1.98e-10!1;UBERON:0005295!1.98e-10!1;UBERON:0004813!1.98e-10!1;UBERON:0005297!1.98e-10!1;UBERON:0005294!1.98e-10!1;UBERON:0010141!1.98e-10!1;UBERON:0005891!1.98e-10!1;UBERON:0000997!2.37e-10!1;UBERON:0005056!2.37e-10!1;UBERON:0001301!6.91e-10!1;UBERON:0005904!9.42e-10!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.21e-40;1!UBERON:0001343;2.21e-40;1!UBERON:0000997;2.21e-40;1!UBERON:0005056;2.21e-40;1!UBERON:0004910;2.21e-40;1!UBERON:0004176;2.21e-40;1!UBERON:0004813;2.21e-40;1!UBERON:0004909;5.69e-21;2!UBERON:0002369;1.22e-14;3!UBERON:0001235;1.22e-14;3!UBERON:0006858;1.22e-14;3!UBERON:0005904;3.42e-11;4!UBERON:0000002;6.78e-08;6!UBERON:0001560;6.78e-08;6!UBERON:0003133;9.04e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.48e-40,1;UBERON:0001343,1.48e-40,1;UBERON:0004910,1.48e-40,1;UBERON:0005154,1.48e-40,1;UBERON:0005295,1.48e-40,1;UBERON:0004813,1.48e-40,1;UBERON:0005297,1.48e-40,1;UBERON:0005294,1.48e-40,1;UBERON:0010141,1.48e-40,1;UBERON:0005891,1.48e-40,1;UBERON:0000997,3.30e-40,1;UBERON:0005056,3.30e-40,1;UBERON:0004909,4.66e-21,2;UBERON:0002369,1.22e-14,3;UBERON:0001235,1.22e-14,3;UBERON:0006858,1.22e-14,3;UBERON:0005904,3.10e-11,4;UBERON:0003133,3.36e-08,48;UBERON:0004176,3.39e-08,22;UBERON:0000002,6.78e-08,6;UBERON:0001560,6.78e-08,6;UBERON:0005156,8.33e-07,59;UBERON:0000990,8.33e-07,59 | |||
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|short_description=p@chr2:165650899..165650926,- | |short_description=p@chr2:165650899..165650926,- | ||
}} | }} |
Latest revision as of 02:03, 29 July 2015
Short description: | p@chr2:165650899..165650926, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:165650899..165650926, - |
Coexpression cluster: | C161_mesothelioma_Mesothelial_acute_mesenchymal_extraskeletal_renal_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.48e-40 | 1 |
seminiferous tubule epithelial cell | 1.48e-40 | 1 |
Sertoli cell | 1.48e-40 | 1 |
cortical cell of adrenal gland | 3.11e-21 | 2 |
mesothelial cell | 1.31e-19 | 19 |
steroid hormone secreting cell | 1.22e-14 | 3 |
squamous epithelial cell | 9.45e-11 | 63 |
protein secreting cell | 6.34e-08 | 6 |
lining cell | 5.78e-07 | 58 |
barrier cell | 5.78e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.48e-40 | 1 |
seminiferous tubule of testis | 1.48e-40 | 1 |
epithelium of male gonad | 1.48e-40 | 1 |
epithelial cord | 1.48e-40 | 1 |
sex cord | 1.48e-40 | 1 |
seminiferous tubule epithelium | 1.48e-40 | 1 |
testis sex cord | 1.48e-40 | 1 |
genital ridge | 1.48e-40 | 1 |
primitive sex cord of indifferent gonad | 1.48e-40 | 1 |
coelomic epithelium | 1.48e-40 | 1 |
mammalian vulva | 3.30e-40 | 1 |
external female genitalia | 3.30e-40 | 1 |
epithelium of gonad | 4.66e-21 | 2 |
adrenal gland | 1.22e-14 | 3 |
adrenal cortex | 1.22e-14 | 3 |
adrenal/interrenal gland | 1.22e-14 | 3 |
duct of male reproductive system | 3.10e-11 | 4 |
reproductive organ | 3.36e-08 | 48 |
external genitalia | 3.39e-08 | 22 |
uterine cervix | 6.78e-08 | 6 |
neck of organ | 6.78e-08 | 6 |
reproductive structure | 8.33e-07 | 59 |
reproductive system | 8.33e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cervical cancer | 3.22e-09 | 5 |
endocrine gland cancer | 5.54e-08 | 6 |