FFCP PHASE1:Hg19::chr18:7133714..7133725,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:7133714..7133725,- | |||
|coexpression_cluster_id=C228 | |||
|description=CAGE_peak_at_chr18:7133714..7133725,- | |description=CAGE_peak_at_chr18:7133714..7133725,- | ||
|id=chr18:7133714..7133725,- | |id=chr18:7133714..7133725,- | ||
|ontology_enrichment_celltype=CL:0002150!1.85e-36!3;CL:0000861!1.85e-36!3;CL:0002563!6.84e-13!4;CL:0000235!2.14e-11!10;CL:0002253!2.15e-07!2 | |ontology_enrichment_celltype=CL:0002150!1.85e-36!3;CL:0000861!1.85e-36!3;CL:0002563!6.84e-13!4;CL:0000235!2.14e-11!10;CL:0002253!2.15e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0002253;4.32e-26;2!CL:0002563;8.82e-14;4!CL:0000039;2.03e-08;7!CL:0000586;2.03e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002253,4.32e-26,2;CL:0002563,8.82e-14,4;CL:0000039,2.03e-08,7;CL:0000586,2.03e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1799!4.23e-13!1;DOID:10165!4.23e-13!1;DOID:1798!4.23e-13!1;DOID:0050687!1.60e-08!143;DOID:305!6.21e-08!106 | |ontology_enrichment_disease=DOID:1799!4.23e-13!1;DOID:10165!4.23e-13!1;DOID:1798!4.23e-13!1;DOID:0050687!1.60e-08!143;DOID:305!6.21e-08!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!6.99e-21!9;UBERON:0001242!6.84e-13!4;UBERON:0001262!6.84e-13!4;UBERON:0004786!6.84e-13!4;UBERON:0004808!6.84e-13!4;UBERON:0001277!6.84e-13!4;UBERON:0003350!1.69e-10!5;UBERON:0001557!4.85e-10!19 | |ontology_enrichment_uberon=UBERON:0001737!6.99e-21!9;UBERON:0001242!6.84e-13!4;UBERON:0001262!6.84e-13!4;UBERON:0004786!6.84e-13!4;UBERON:0004808!6.84e-13!4;UBERON:0001277!6.84e-13!4;UBERON:0003350!1.69e-10!5;UBERON:0001557!4.85e-10!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001052;8.82e-14;4!UBERON:0001242;8.82e-14;4!UBERON:0001262;8.82e-14;4!UBERON:0004786;8.82e-14;4!UBERON:0004808;8.82e-14;4!UBERON:0001277;8.82e-14;4!UBERON:0004907;2.66e-11;5!UBERON:0000485;1.89e-08;7!UBERON:0003929;1.89e-08;7!UBERON:0003350;1.49e-07;8!UBERON:0001155;7.48e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,8.82e-14,4;UBERON:0001242,8.82e-14,4;UBERON:0001262,8.82e-14,4;UBERON:0004786,8.82e-14,4;UBERON:0004808,8.82e-14,4;UBERON:0001277,8.82e-14,4;UBERON:0004907,2.66e-11,5;UBERON:0003350,1.49e-07,8;UBERON:0001155,7.48e-07,9;UBERON:0000485,7.48e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60753692612819,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38194521445217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54810130062536,1.31560770755134,0.574808199372465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337169380156203,0.241011029883482,0.220587945464788,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.60753692612819,0,0,0,0,0,0,0,0,0,0,0,0,0,4.38194521445217,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.54810130062536,1.31560770755134,0.574808199372465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23248285073625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0.267964130156178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr18:7133714..7133725,- | |short_description=p@chr18:7133714..7133725,- | ||
}} | }} |
Latest revision as of 02:05, 26 July 2015
Short description: | p@chr18:7133714..7133725, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:7133714..7133725, - |
Coexpression cluster: | C228_colon_Intestinal_Prostate_hepatoblastoma_hepatocellular_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of large intestine | 4.32e-26 | 2 |
intestinal epithelial cell | 8.82e-14 | 4 |
germ line cell | 2.03e-08 | 7 |
germ cell | 2.03e-08 | 7 |
Ontology term | p-value | n |
---|---|---|
rectum | 8.82e-14 | 4 |
intestinal mucosa | 8.82e-14 | 4 |
wall of intestine | 8.82e-14 | 4 |
gastrointestinal system mucosa | 8.82e-14 | 4 |
gastrointestinal system epithelium | 8.82e-14 | 4 |
intestinal epithelium | 8.82e-14 | 4 |
lower digestive tract | 2.66e-11 | 5 |
epithelium of mucosa | 1.49e-07 | 8 |
colon | 7.48e-07 | 9 |
simple columnar epithelium | 7.48e-07 | 9 |