FFCP PHASE1:Hg19::chr2:37594397..37594409,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25797 | |EntrezGene=25797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9753 | |HGNC=9753 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=131bp_to_ENST00000469098_5end | |association_with_transcript=131bp_to_ENST00000469098_5end | ||
|cluster_id=chr2:37594397..37594409,+ | |||
|coexpression_cluster_id=C58 | |||
|description=CAGE_peak_5_at_QPCT_5end | |description=CAGE_peak_5_at_QPCT_5end | ||
|id=chr2:37594397..37594409,+ | |id=chr2:37594397..37594409,+ | ||
|ontology_enrichment_celltype=CL:0000148!2.35e-23!10;CL:0000541!2.35e-23!10;CL:0000147!1.57e-16!14;CL:0000710!2.12e-11!20;CL:0002567!8.38e-10!3;CL:0000075!2.74e-08!27;CL:0002566!4.89e-08!1 | |ontology_enrichment_celltype=CL:0000148!2.35e-23!10;CL:0000541!2.35e-23!10;CL:0000147!1.57e-16!14;CL:0000710!2.12e-11!20;CL:0002567!8.38e-10!3;CL:0000075!2.74e-08!27;CL:0002566!4.89e-08!1 | ||
|ontology_enrichment_celltype_v019=CL:0000148;2.37e-70;10!CL:0000147;1.87e-50;14!CL:0002567;2.64e-38;3!CL:0000710;1.65e-35;20!CL:0002566;1.33e-29;1!CL:0000075;1.89e-26;27!CL:0002077;2.21e-21;34!CL:0000149;1.70e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,2.74e-70,10;CL:0000541,2.74e-70,10;CL:0000147,2.07e-50,14;CL:0002567,2.64e-38,3;CL:0000710,1.77e-35,20;CL:0002566,1.33e-29,1;CL:0000075,2.00e-26,27;CL:0002077,4.34e-21,34;CL:0000333,9.06e-17,41;CL:0000133,6.21e-12,59;CL:0000221,6.82e-10,72;CL:0000149,1.70e-08,4 | |||
|ontology_enrichment_development_v019=CL:0000133;1.37e-07;59 | |||
|ontology_enrichment_disease=DOID:1909!2.37e-14!2;DOID:4235!1.91e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1909;4.77e-57;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,3.58e-57,2 | |||
|ontology_enrichment_uberon=UBERON:0001736!7.26e-08!1;UBERON:0006298!7.26e-08!1;UBERON:0002135!1.30e-07!1;UBERON:0002581!2.80e-07!1;UBERON:0001882!2.98e-07!1;UBERON:0005403!2.98e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;1.53e-08;15!UBERON:0007376;1.53e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,1.47e-08,15;UBERON:0007376,1.47e-08,15;UBERON:0007383,1.47e-08,15 | |||
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|short_description=p5@QPCT | |short_description=p5@QPCT | ||
}} | }} |
Latest revision as of 02:21, 17 September 2015
Short description: | p5@QPCT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_QPCT_5end |
Coexpression cluster: | C58_Melanocyte_melanoma_retina_Retinal_eye_migratory_H9 |
Association with transcript: | 131bp_to_ENST00000469098_5end |
EntrezGene: | QPCT |
HGNC: | 9753 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 2.74e-70 | 10 |
melanoblast | 2.74e-70 | 10 |
pigment cell | 2.07e-50 | 14 |
light melanocyte | 2.64e-38 | 3 |
neurecto-epithelial cell | 1.77e-35 | 20 |
dark melanocyte | 1.33e-29 | 1 |
columnar/cuboidal epithelial cell | 2.00e-26 | 27 |
ecto-epithelial cell | 4.34e-21 | 34 |
migratory neural crest cell | 9.06e-17 | 41 |
neurectodermal cell | 6.21e-12 | 59 |
ectodermal cell | 6.82e-10 | 72 |
visual pigment cell | 1.70e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
skin epidermis | 1.47e-08 | 15 |
outer epithelium | 1.47e-08 | 15 |
enveloping layer of ectoderm | 1.47e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
melanoma | 3.58e-57 | 2 |