FFCP PHASE1:Hg19::chr19:1753387..1753395,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:1753387..1753395,- | |||
|coexpression_cluster_id=C133 | |||
|description=CAGE_peak_at_chr19:1753387..1753395,- | |description=CAGE_peak_at_chr19:1753387..1753395,- | ||
|id=chr19:1753387..1753395,- | |id=chr19:1753387..1753395,- | ||
|ontology_enrichment_celltype=CL:0002178!5.05e-18!3;CL:0000223!3.00e-07!59;CL:0002076!3.32e-07!43 | |ontology_enrichment_celltype=CL:0002178!5.05e-18!3;CL:0000223!3.00e-07!59;CL:0002076!3.32e-07!43 | ||
|ontology_enrichment_celltype_v019=CL:0002178;1.52e-87;3!CL:0002251;2.76e-14;20!CL:0002076;1.82e-07;42 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,1.52e-87,3;CL:0002251,2.76e-14,20;CL:0002076,2.17e-07,42 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!1.47e-26!2;DOID:299!7.25e-18!25;DOID:3111!8.58e-14!1;DOID:3603!8.58e-14!1;DOID:305!7.16e-13!106;DOID:0050687!4.62e-11!143;DOID:3119!1.01e-08!14;DOID:162!2.76e-07!235;DOID:14566!4.25e-07!239 | |ontology_enrichment_disease=DOID:3493!1.47e-26!2;DOID:299!7.25e-18!25;DOID:3111!8.58e-14!1;DOID:3603!8.58e-14!1;DOID:305!7.16e-13!106;DOID:0050687!4.62e-11!143;DOID:3119!1.01e-08!14;DOID:162!2.76e-07!235;DOID:14566!4.25e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:3493;6.43e-131;2!DOID:299;1.10e-24;25!DOID:3119;7.13e-20;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,8.99e-131,2;DOID:299,1.10e-24,25;DOID:3119,7.13e-20,14 | |||
|ontology_enrichment_uberon=UBERON:0000945!2.53e-07!8;UBERON:0010039!2.53e-07!8 | |ontology_enrichment_uberon=UBERON:0000945!2.53e-07!8;UBERON:0010039!2.53e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0000945;3.74e-53;5!UBERON:0010039;3.74e-53;5!UBERON:0001041;7.13e-20;14!UBERON:0005409;1.41e-12;22!UBERON:0004921;2.59e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,9.08e-34,8;UBERON:0010039,9.08e-34,8;UBERON:0005409,2.91e-11,25 | |||
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|short_description=p@chr19:1753387..1753395,- | |short_description=p@chr19:1753387..1753395,- | ||
}} | }} |
Latest revision as of 04:53, 26 July 2015
Short description: | p@chr19:1753387..1753395, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:1753387..1753395, - |
Coexpression cluster: | C133_signet_gall_small_kidney_colon_ductal_adenocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 1.52e-87 | 3 |
epithelial cell of alimentary canal | 2.76e-14 | 20 |
endo-epithelial cell | 2.17e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
stomach | 9.08e-34 | 8 |
food storage organ | 9.08e-34 | 8 |
gastrointestinal system | 2.91e-11 | 25 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 8.99e-131 | 2 |
adenocarcinoma | 1.10e-24 | 25 |
gastrointestinal system cancer | 7.13e-20 | 14 |