FFCP PHASE1:Hg19::chr2:80688870..80688884,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr2:80688870..80688884,+ | |||
|coexpression_cluster_id=C74 | |||
|description=CAGE_peak_at_chr2:80688870..80688884,+ | |description=CAGE_peak_at_chr2:80688870..80688884,+ | ||
|id=chr2:80688870..80688884,+ | |id=chr2:80688870..80688884,+ | ||
|ontology_enrichment_celltype=CL:0000945!7.54e-31!24;CL:0000826!7.54e-31!24;CL:0000946!1.04e-16!1;CL:0000786!1.04e-16!1;CL:0000980!1.04e-16!1;CL:0000838!4.77e-14!52;CL:0000542!8.94e-14!53;CL:0000051!8.94e-14!53;CL:0000785!5.08e-09!2;CL:0000955!5.08e-09!2;CL:0000818!5.08e-09!2;CL:0000954!5.08e-09!2;CL:0000816!5.08e-09!2 | |ontology_enrichment_celltype=CL:0000945!7.54e-31!24;CL:0000826!7.54e-31!24;CL:0000946!1.04e-16!1;CL:0000786!1.04e-16!1;CL:0000980!1.04e-16!1;CL:0000838!4.77e-14!52;CL:0000542!8.94e-14!53;CL:0000051!8.94e-14!53;CL:0000785!5.08e-09!2;CL:0000955!5.08e-09!2;CL:0000818!5.08e-09!2;CL:0000954!5.08e-09!2;CL:0000816!5.08e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.66e-42;24!CL:0000946;3.64e-29;1!CL:0000786;3.64e-29;1!CL:0000542;1.13e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.66e-42,24;CL:0000826,2.66e-42,24;CL:0000946,3.16e-29,1;CL:0000786,3.16e-29,1;CL:0000980,3.16e-29,1;CL:0000838,9.24e-20,52;CL:0000542,2.15e-19,53;CL:0000051,2.15e-19,53;CL:0000785,2.37e-15,2;CL:0000955,2.37e-15,2;CL:0000818,2.37e-15,2;CL:0000954,2.37e-15,2;CL:0000816,2.37e-15,2;CL:0000817,1.09e-10,3;CL:0002087,5.38e-09,115;CL:0002031,1.25e-08,120;CL:0000738,1.23e-07,136 | |||
|ontology_enrichment_development_v019=CL:0000954;2.55e-15;2!CL:0000051;1.13e-07;53 | |||
|ontology_enrichment_disease=DOID:630!8.86e-17!1;DOID:0050177!8.86e-17!1;DOID:0050427!8.86e-17!1;DOID:2355!1.21e-16!1;DOID:74!5.49e-09!2;DOID:0060058!3.89e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:630;2.05e-29;1!DOID:0050177;2.05e-29;1!DOID:0050427;2.05e-29;1!DOID:2355;3.64e-29;1!DOID:74;2.55e-15;2!DOID:0060058;2.44e-12;10!DOID:1287;2.52e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.37e-29,1;DOID:0050177,2.37e-29,1;DOID:0050427,2.37e-29,1;DOID:2355,4.20e-29,1;DOID:74,2.74e-15,2;DOID:0060058,2.51e-12,10;DOID:1287,2.61e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0001950!4.80e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;6.73e-11;3!UBERON:0004177;4.79e-07;5!UBERON:0005057;4.79e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.73e-11,3;UBERON:0004854,6.73e-11,3;UBERON:0009034,6.73e-11,3;UBERON:0002095,6.73e-11,3;UBERON:0004782,6.73e-11,3;UBERON:0003281,6.73e-11,3;UBERON:0009664,6.73e-11,3;UBERON:0002296,6.73e-11,3;UBERON:0005602,6.73e-11,3;UBERON:0001179,6.73e-11,3;UBERON:0006293,6.73e-11,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8272960126742,3.11982239909794,3.69940672174292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27009998098677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,1.38280785066935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99529247399431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24397944612263 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8272960126742,3.11982239909794,3.69940672174292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27009998098677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0,1.38280785066935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.99529247399431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24397944612263 | ||
|short_description=p@chr2:80688870..80688884,+ | |short_description=p@chr2:80688870..80688884,+ | ||
}} | }} |
Latest revision as of 12:32, 29 July 2015
Short description: | p@chr2:80688870..80688884, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:80688870..80688884, + |
Coexpression cluster: | C74_splenic_B_b_plasma_xeroderma_lymphoma_hairy |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.66e-42 | 24 |
pro-B cell | 2.66e-42 | 24 |
antibody secreting cell | 3.16e-29 | 1 |
plasma cell | 3.16e-29 | 1 |
plasmablast | 3.16e-29 | 1 |
lymphoid lineage restricted progenitor cell | 9.24e-20 | 52 |
lymphocyte | 2.15e-19 | 53 |
common lymphoid progenitor | 2.15e-19 | 53 |
mature B cell | 2.37e-15 | 2 |
pre-B-II cell | 2.37e-15 | 2 |
transitional stage B cell | 2.37e-15 | 2 |
small pre-B-II cell | 2.37e-15 | 2 |
immature B cell | 2.37e-15 | 2 |
precursor B cell | 1.09e-10 | 3 |
nongranular leukocyte | 5.38e-09 | 115 |
hematopoietic lineage restricted progenitor cell | 1.25e-08 | 120 |
leukocyte | 1.23e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
spleen | 6.73e-11 | 3 |
gastrointestinal system mesentery | 6.73e-11 | 3 |
stomach region | 6.73e-11 | 3 |
mesentery | 6.73e-11 | 3 |
gastrointestinal system serosa | 6.73e-11 | 3 |
mesentery of stomach | 6.73e-11 | 3 |
gut mesentery | 6.73e-11 | 3 |
dorsal mesentery | 6.73e-11 | 3 |
dorsal mesogastrium | 6.73e-11 | 3 |
peritoneal cavity | 6.73e-11 | 3 |
spleen primordium | 6.73e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.37e-29 | 1 |
monogenic disease | 2.37e-29 | 1 |
xeroderma pigmentosum | 2.37e-29 | 1 |
anemia | 4.20e-29 | 1 |
hematopoietic system disease | 2.74e-15 | 2 |
lymphoma | 2.51e-12 | 10 |
cardiovascular system disease | 2.61e-08 | 4 |