FFCP PHASE1:Hg19::chr3:122295630..122295664,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:122295630..122295664,+ | |||
|coexpression_cluster_id=C650 | |||
|description=CAGE_peak_at_chr3:122295630..122295664,+ | |description=CAGE_peak_at_chr3:122295630..122295664,+ | ||
|id=chr3:122295630..122295664,+ | |id=chr3:122295630..122295664,+ | ||
|ontology_enrichment_celltype=CL:0002087!1.73e-33!119;CL:0000738!9.74e-32!140;CL:0002031!1.66e-29!124;CL:0000037!1.39e-24!172;CL:0000566!1.39e-24!172;CL:0000945!4.50e-24!24;CL:0000826!4.50e-24!24;CL:0002057!4.23e-23!42;CL:0000988!7.34e-23!182;CL:0002032!2.60e-22!165;CL:0000837!2.60e-22!165;CL:0000860!2.45e-21!45;CL:0000542!3.46e-18!53;CL:0000051!3.46e-18!53;CL:0000838!4.50e-16!52;CL:0002009!1.72e-15!65;CL:0002194!5.01e-14!63;CL:0000576!5.01e-14!63;CL:0000040!5.01e-14!63;CL:0000559!5.01e-14!63;CL:0000557!6.59e-14!71;CL:0000236!7.68e-13!14;CL:0000839!2.53e-12!70;CL:0000766!4.10e-11!76;CL:0000134!3.14e-08!358;CL:0002320!6.13e-08!365;CL:0000763!1.25e-07!112;CL:0000049!1.25e-07!112;CL:0000623!3.80e-07!3;CL:0000825!3.80e-07!3;CL:0000219!6.46e-07!390 | |ontology_enrichment_celltype=CL:0002087!1.73e-33!119;CL:0000738!9.74e-32!140;CL:0002031!1.66e-29!124;CL:0000037!1.39e-24!172;CL:0000566!1.39e-24!172;CL:0000945!4.50e-24!24;CL:0000826!4.50e-24!24;CL:0002057!4.23e-23!42;CL:0000988!7.34e-23!182;CL:0002032!2.60e-22!165;CL:0000837!2.60e-22!165;CL:0000860!2.45e-21!45;CL:0000542!3.46e-18!53;CL:0000051!3.46e-18!53;CL:0000838!4.50e-16!52;CL:0002009!1.72e-15!65;CL:0002194!5.01e-14!63;CL:0000576!5.01e-14!63;CL:0000040!5.01e-14!63;CL:0000559!5.01e-14!63;CL:0000557!6.59e-14!71;CL:0000236!7.68e-13!14;CL:0000839!2.53e-12!70;CL:0000766!4.10e-11!76;CL:0000134!3.14e-08!358;CL:0002320!6.13e-08!365;CL:0000763!1.25e-07!112;CL:0000049!1.25e-07!112;CL:0000623!3.80e-07!3;CL:0000825!3.80e-07!3;CL:0000219!6.46e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000945;2.49e-41;24!CL:0000946;8.05e-14;1!CL:0000786;8.05e-14;1!CL:0002087;3.22e-11;104!CL:0000542;5.08e-10;53!CL:0000236;1.82e-09;13!CL:0000860;7.42e-09;33!CL:0002057;7.42e-09;33!CL:0000473;6.58e-08;39!CL:0000234;6.58e-08;39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,2.80e-41,24;CL:0000826,2.80e-41,24;CL:0002087,2.12e-19,115;CL:0000838,1.43e-18,52;CL:0002031,1.57e-18,120;CL:0000542,3.34e-18,53;CL:0000051,3.34e-18,53;CL:0000738,3.58e-16,136;CL:0000236,8.31e-15,14;CL:0000946,8.58e-14,1;CL:0000786,8.58e-14,1;CL:0000980,8.58e-14,1;CL:0002032,2.05e-13,161;CL:0000837,2.05e-13,161;CL:0000037,8.72e-13,168;CL:0000988,4.74e-12,177;CL:0000785,1.54e-07,2;CL:0000955,1.54e-07,2;CL:0000818,1.54e-07,2;CL:0000954,1.54e-07,2;CL:0000816,1.54e-07,2;CL:0000860,2.78e-07,42;CL:0002057,2.78e-07,42 | |||
|ontology_enrichment_development_v019=CL:0000051;5.08e-10;53!CL:0000954;1.50e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:630;1.51e-13;1!DOID:0050177;1.51e-13;1!DOID:0050427;1.51e-13;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.07e-13,1;DOID:0050177,2.07e-13,1;DOID:0050427,2.07e-13,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.64e-13!102;UBERON:0003061!8.64e-13!102;UBERON:0002193!1.14e-12!112;UBERON:0002371!5.64e-12!80;UBERON:0001474!6.53e-11!86;UBERON:0002405!7.83e-11!115;UBERON:0004765!8.27e-09!101;UBERON:0001434!8.27e-09!101;UBERON:0002384!1.53e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr3:122295630..122295664,+ | |short_description=p@chr3:122295630..122295664,+ | ||
}} | }} |
Latest revision as of 15:02, 29 July 2015
Short description: | p@chr3:122295630..122295664, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:122295630..122295664, + |
Coexpression cluster: | C650_CD19_B_lymphoma_xeroderma_splenic_Burkitt_plasma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 2.80e-41 | 24 |
pro-B cell | 2.80e-41 | 24 |
nongranular leukocyte | 2.12e-19 | 115 |
lymphoid lineage restricted progenitor cell | 1.43e-18 | 52 |
hematopoietic lineage restricted progenitor cell | 1.57e-18 | 120 |
lymphocyte | 3.34e-18 | 53 |
common lymphoid progenitor | 3.34e-18 | 53 |
leukocyte | 3.58e-16 | 136 |
B cell | 8.31e-15 | 14 |
antibody secreting cell | 8.58e-14 | 1 |
plasma cell | 8.58e-14 | 1 |
plasmablast | 8.58e-14 | 1 |
hematopoietic oligopotent progenitor cell | 2.05e-13 | 161 |
hematopoietic multipotent progenitor cell | 2.05e-13 | 161 |
hematopoietic stem cell | 8.72e-13 | 168 |
hematopoietic cell | 4.74e-12 | 177 |
mature B cell | 1.54e-07 | 2 |
pre-B-II cell | 1.54e-07 | 2 |
transitional stage B cell | 1.54e-07 | 2 |
small pre-B-II cell | 1.54e-07 | 2 |
immature B cell | 1.54e-07 | 2 |
classical monocyte | 2.78e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.78e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.07e-13 | 1 |
monogenic disease | 2.07e-13 | 1 |
xeroderma pigmentosum | 2.07e-13 | 1 |