FFCP PHASE1:Hg19::chr19:4233141..4233152,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:4233141..4233152,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr19:4233141..4233152,+ | |description=CAGE_peak_at_chr19:4233141..4233152,+ | ||
|id=chr19:4233141..4233152,+ | |id=chr19:4233141..4233152,+ | ||
|ontology_enrichment_celltype=CL:0002541!7.61e-12!3;CL:0000945!6.89e-08!24;CL:0000826!6.89e-08!24 | |ontology_enrichment_celltype=CL:0002541!7.61e-12!3;CL:0000945!6.89e-08!24;CL:0000826!6.89e-08!24 | ||
|ontology_enrichment_celltype_v019=CL:0002541;7.92e-55;3!CL:0000349;2.93e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,7.24e-55,3;CL:0000349,2.89e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.08e-19;1!UBERON:0004872;2.49e-11;7 | |||
|ontology_enrichment_disease=DOID:4468!2.63e-07!2 | |ontology_enrichment_disease=DOID:4468!2.63e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:0060060;1.71e-19;1!DOID:0060061;1.71e-19;1!DOID:8691;1.71e-19;1!DOID:0060058;3.63e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,1.56e-19,1;DOID:0060061,1.56e-19,1;DOID:8691,1.56e-19,1;DOID:0060058,3.37e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0000476!7.61e-12!3;UBERON:0000920!7.61e-12!3;UBERON:0004177!2.85e-11!7;UBERON:0002106!1.29e-10!3;UBERON:0004854!1.29e-10!3;UBERON:0009034!1.29e-10!3;UBERON:0002095!1.29e-10!3;UBERON:0004782!1.29e-10!3;UBERON:0003281!1.29e-10!3;UBERON:0009664!1.29e-10!3;UBERON:0002296!1.29e-10!3;UBERON:0005602!1.29e-10!3;UBERON:0001179!1.29e-10!3;UBERON:0006293!1.29e-10!3;UBERON:0000478!2.50e-10!24;UBERON:0003124!1.09e-08!7;UBERON:0005631!1.42e-08!14;UBERON:0000158!1.42e-08!14;UBERON:0002193!6.23e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;7.92e-55;3!UBERON:0000920;7.92e-55;3!UBERON:0005631;5.12e-17;10!UBERON:0000158;5.12e-17;10!UBERON:0000478;1.63e-12;24!UBERON:0002106;2.88e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,7.24e-55,3;UBERON:0003124,7.97e-42,7;UBERON:0005631,3.56e-21,14;UBERON:0000158,3.56e-21,14;UBERON:0000478,1.61e-12,24;UBERON:0002106,2.63e-07,3;UBERON:0004854,2.63e-07,3;UBERON:0009034,2.63e-07,3;UBERON:0002095,2.63e-07,3;UBERON:0004782,2.63e-07,3;UBERON:0003281,2.63e-07,3;UBERON:0009664,2.63e-07,3;UBERON:0002296,2.63e-07,3;UBERON:0005602,2.63e-07,3;UBERON:0001179,2.63e-07,3;UBERON:0006293,2.63e-07,3;UBERON:0004923,5.85e-07,66 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91033514369878,0.903106483949403,0.708397031823113,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0.236482229888585,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,1.13477044938228,0,0,0,0,0.605399502633369,0,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.402829317109147,0.760272105718513,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.23649213977267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.16530741786592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0,0,0,0,0.861593638227486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,3.50901275705111,1.37396390102793,11.1937302963913,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0.889563386041866,0.988511511572023,0.730953646538188,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.132864840313363,0.163565394255844,0,0,0,2.59983614611409,0,0.344429959321631,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0.606965604236632,0,5.58824932024625,0.691403925334676,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.375935671919414,0.0644578879735772,1.59905849479886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203977659483963,0,0,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0.961705476909699 | ||
|short_description=p@chr19:4233141..4233152,+ | |short_description=p@chr19:4233141..4233152,+ | ||
}} | }} |
Latest revision as of 08:38, 26 July 2015
Short description: | p@chr19:4233141..4233152, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:4233141..4233152, + |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 7.24e-55 | 3 |
extraembryonic cell | 2.89e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 7.24e-55 | 3 |
chorion | 7.97e-42 | 7 |
extraembryonic membrane | 3.56e-21 | 14 |
membranous layer | 3.56e-21 | 14 |
extraembryonic structure | 1.61e-12 | 24 |
spleen | 2.63e-07 | 3 |
gastrointestinal system mesentery | 2.63e-07 | 3 |
stomach region | 2.63e-07 | 3 |
mesentery | 2.63e-07 | 3 |
gastrointestinal system serosa | 2.63e-07 | 3 |
mesentery of stomach | 2.63e-07 | 3 |
gut mesentery | 2.63e-07 | 3 |
dorsal mesentery | 2.63e-07 | 3 |
dorsal mesogastrium | 2.63e-07 | 3 |
peritoneal cavity | 2.63e-07 | 3 |
spleen primordium | 2.63e-07 | 3 |
organ component layer | 5.85e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 1.56e-19 | 1 |
cutaneous T cell lymphoma | 1.56e-19 | 1 |
mycosis fungoides | 1.56e-19 | 1 |
lymphoma | 3.37e-08 | 10 |