FFCP PHASE1:Hg19::chr19:50435737..50435755,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:50435737..50435755,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_at_chr19:50435737..50435755,- | |description=CAGE_peak_at_chr19:50435737..50435755,- | ||
|id=chr19:50435737..50435755,- | |id=chr19:50435737..50435755,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;2.88e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.40e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3193;2.62e-11;2!DOID:962;2.62e-11;2!DOID:1192;8.17e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:3193,1.70e-11,2;DOID:962,1.70e-11,2;DOID:1192,6.14e-08,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0005406;2.62e-11;2!UBERON:0002107;1.29e-09;19!UBERON:0006925;1.29e-09;19!UBERON:0002423;3.77e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005406,2.09e-11,2;UBERON:0002107,1.09e-09,19;UBERON:0006925,1.09e-09,19;UBERON:0008836,1.09e-09,19;UBERON:0008835,2.82e-08,22;UBERON:0003894,2.82e-08,22;UBERON:0009854,6.91e-08,23;UBERON:0007499,3.34e-07,25;UBERON:0009497,3.34e-07,25;UBERON:0000015,3.34e-07,25;UBERON:0002423,3.34e-07,25;UBERON:0006235,3.34e-07,25;UBERON:0004161,3.34e-07,25;UBERON:0002417,6.37e-07,60;UBERON:0000916,6.37e-07,60;UBERON:0009856,6.71e-07,26 | |||
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| ||
|short_description=p@chr19:50435737..50435755,- | |short_description=p@chr19:50435737..50435755,- | ||
}} | }} |
Latest revision as of 16:19, 27 July 2015
Short description: | p@chr19:50435737..50435755, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:50435737..50435755, - |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.40e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
perirenal fat | 2.09e-11 | 2 |
liver | 1.09e-09 | 19 |
digestive gland | 1.09e-09 | 19 |
liver bud | 1.09e-09 | 19 |
hepatic diverticulum | 2.82e-08 | 22 |
liver primordium | 2.82e-08 | 22 |
digestive tract diverticulum | 6.91e-08 | 23 |
epithelial sac | 3.34e-07 | 25 |
epithelium of foregut-midgut junction | 3.34e-07 | 25 |
anatomical boundary | 3.34e-07 | 25 |
hepatobiliary system | 3.34e-07 | 25 |
foregut-midgut junction | 3.34e-07 | 25 |
septum transversum | 3.34e-07 | 25 |
abdominal segment of trunk | 6.37e-07 | 60 |
abdomen | 6.37e-07 | 60 |
sac | 6.71e-07 | 26 |
Ontology term | p-value | n |
---|---|---|
peripheral nerve sheath neoplasm | 1.70e-11 | 2 |
neurofibroma | 1.70e-11 | 2 |
peripheral nervous system neoplasm | 6.14e-08 | 3 |