FFCP PHASE1:Hg19::chr3:160122115..160122187,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10051 | |EntrezGene=10051 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14013 | |HGNC=14013 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-99bp_to_ENST00000487747_5end | |association_with_transcript=-99bp_to_ENST00000487747_5end | ||
|cluster_id=chr3:160122115..160122187,+ | |||
|description=CAGE_peak_2_at_SMC4_5end | |description=CAGE_peak_2_at_SMC4_5end | ||
|id=chr3:160122115..160122187,+ | |id=chr3:160122115..160122187,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!4.21e-39!235;DOID:14566!4.74e-39!239;DOID:0050686!1.30e-18!137;DOID:2531!3.28e-18!51;DOID:0060083!3.28e-18!51;DOID:1240!1.17e-15!39;DOID:0050687!9.24e-15!143;DOID:8692!1.33e-12!31;DOID:305!4.83e-10!106 | |||
|ontology_enrichment_disease_v019=DOID:1240;6.67e-14;39!DOID:8692;1.37e-13;31!DOID:2531;6.74e-13;51!DOID:0060083;6.74e-13;51 | |||
|ontology_enrichment_disease_v019_2=DOID:14566,3.42e-30,239;DOID:162,1.38e-29,235;DOID:2531,2.84e-20,51;DOID:0060083,2.84e-20,51;DOID:1240,2.43e-18,39;DOID:8692,2.57e-14,31;DOID:0050686,2.23e-13,137;DOID:0050687,1.23e-09,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@SMC4 | |short_description=p2@SMC4 | ||
}} | }} |
Latest revision as of 10:14, 16 September 2015
Short description: | p2@SMC4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SMC4_5end |
Coexpression cluster: | NA |
Association with transcript: | -99bp_to_ENST00000487747_5end |
EntrezGene: | SMC4 |
HGNC: | 14013 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
disease of cellular proliferation | 3.42e-30 | 239 |
cancer | 1.38e-29 | 235 |
hematologic cancer | 2.84e-20 | 51 |
immune system cancer | 2.84e-20 | 51 |
leukemia | 2.43e-18 | 39 |
myeloid leukemia | 2.57e-14 | 31 |
organ system cancer | 2.23e-13 | 137 |
cell type cancer | 1.23e-09 | 143 |