FFCP PHASE1:Hg19::chr19:54545761..54545772,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:54545761..54545772,- | |||
|coexpression_cluster_id=C165 | |||
|description=CAGE_peak_at_chr19:54545761..54545772,- | |description=CAGE_peak_at_chr19:54545761..54545772,- | ||
|id=chr19:54545761..54545772,- | |id=chr19:54545761..54545772,- | ||
|ontology_enrichment_celltype=CL:0002097!2.53e-16!2;CL:0000174!3.44e-11!3;CL:0002573!5.41e-11!2;CL:0000077!7.09e-10!19;CL:0000313!1.65e-08!1;CL:0000243!4.16e-07!15;CL:0000125!4.16e-07!15;CL:0000030!4.16e-07!15;CL:0000339!4.16e-07!15 | |ontology_enrichment_celltype=CL:0002097!2.53e-16!2;CL:0000174!3.44e-11!3;CL:0002573!5.41e-11!2;CL:0000077!7.09e-10!19;CL:0000313!1.65e-08!1;CL:0000243!4.16e-07!15;CL:0000125!4.16e-07!15;CL:0000030!4.16e-07!15;CL:0000339!4.16e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002097;5.15e-21;2!CL:0000174;1.71e-14;3!CL:0000077;2.36e-09;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,4.66e-21,2;CL:0000174,1.60e-14,3;CL:0000077,2.17e-09,19 | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.10e-09;5 | |||
|ontology_enrichment_disease=DOID:4468!4.65e-16!2;DOID:305!4.46e-11!106;DOID:14566!9.11e-10!239;DOID:6193!3.06e-09!1;DOID:3112!3.87e-09!1;DOID:0050687!7.17e-09!143;DOID:2152!1.65e-08!1;DOID:162!8.40e-08!235;DOID:299!2.49e-07!25;DOID:3908!5.91e-07!5 | |ontology_enrichment_disease=DOID:4468!4.65e-16!2;DOID:305!4.46e-11!106;DOID:14566!9.11e-10!239;DOID:6193!3.06e-09!1;DOID:3112!3.87e-09!1;DOID:0050687!7.17e-09!143;DOID:2152!1.65e-08!1;DOID:162!8.40e-08!235;DOID:299!2.49e-07!25;DOID:3908!5.91e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:6193;6.62e-41;1!DOID:3112;1.81e-40;1!DOID:3350;3.11e-21;2!DOID:4468;5.15e-21;2!DOID:170;6.55e-08;6!DOID:299;2.43e-07;25 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,6.62e-41,1;DOID:3112,2.21e-40,1;DOID:3350,3.11e-21,2;DOID:4468,6.96e-21,2;DOID:170,6.34e-08,6;DOID:299,2.58e-07,25 | |||
|ontology_enrichment_uberon=UBERON:0002369!3.44e-11!3;UBERON:0001235!3.44e-11!3;UBERON:0006858!3.44e-11!3;UBERON:0003112!1.22e-08!1;UBERON:0000032!1.22e-08!1;UBERON:0005253!1.22e-08!1;UBERON:0003128!1.22e-08!1;UBERON:0002241!1.22e-08!1;UBERON:0001703!1.22e-08!1;UBERON:0004761!1.22e-08!1;UBERON:0009617!1.22e-08!1;UBERON:0004911!1.65e-08!1;UBERON:0002046!4.38e-07!5;UBERON:0004117!4.38e-07!5;UBERON:0007689!4.38e-07!5;UBERON:0007123!4.38e-07!5;UBERON:0003091!4.38e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002369;1.71e-14;3!UBERON:0001235;1.71e-14;3!UBERON:0006858;1.71e-14;3!UBERON:0002046;3.10e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002369,1.60e-14,3;UBERON:0001235,1.60e-14,3;UBERON:0006858,1.60e-14,3;UBERON:0002046,3.22e-09,5;UBERON:0004117,3.22e-09,5;UBERON:0007689,3.22e-09,5;UBERON:0007123,3.22e-09,5;UBERON:0003091,3.22e-09,5 | |||
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|short_description=p@chr19:54545761..54545772,- | |short_description=p@chr19:54545761..54545772,- | ||
}} | }} |
Latest revision as of 17:07, 27 July 2015
Short description: | p@chr19:54545761..54545772, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:54545761..54545772, - |
Coexpression cluster: | C165_epithelioid_Adipocyte_mesothelioma_myxofibrosarcoma_lung_gastric_Mesothelial |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 4.66e-21 | 2 |
steroid hormone secreting cell | 1.60e-14 | 3 |
mesothelial cell | 2.17e-09 | 19 |
Ontology term | p-value | n |
---|---|---|
adrenal gland | 1.60e-14 | 3 |
adrenal cortex | 1.60e-14 | 3 |
adrenal/interrenal gland | 1.60e-14 | 3 |
thyroid gland | 3.22e-09 | 5 |
pharyngeal pouch | 3.22e-09 | 5 |
thyroid diverticulum | 3.22e-09 | 5 |
pharyngeal pouch 2 | 3.22e-09 | 5 |
thyroid primordium | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 6.62e-41 | 1 |
papillary adenocarcinoma | 2.21e-40 | 1 |
mesenchymal cell neoplasm | 3.11e-21 | 2 |
clear cell adenocarcinoma | 6.96e-21 | 2 |
endocrine gland cancer | 6.34e-08 | 6 |
adenocarcinoma | 2.58e-07 | 25 |