FFCP PHASE1:Hg19::chr19:7754043..7754058,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr19:7754043..7754058,- | |||
|coexpression_cluster_id=C36 | |||
|description=CAGE_peak_at_chr19:7754043..7754058,- | |description=CAGE_peak_at_chr19:7754043..7754058,- | ||
|id=chr19:7754043..7754058,- | |id=chr19:7754043..7754058,- | ||
|ontology_enrichment_celltype=CL:0000945!2.16e-76!24;CL:0000826!2.16e-76!24;CL:0000236!2.21e-47!14;CL:0000838!2.87e-36!52;CL:0000542!1.72e-35!53;CL:0000051!1.72e-35!53;CL:0002087!6.09e-34!119;CL:0002031!4.21e-30!124;CL:0000738!7.75e-28!140;CL:0000037!1.09e-24!172;CL:0000566!1.09e-24!172;CL:0002032!2.74e-24!165;CL:0000837!2.74e-24!165;CL:0000988!6.11e-23!182;CL:0000785!1.23e-10!2;CL:0000955!1.23e-10!2;CL:0000818!1.23e-10!2;CL:0000954!1.23e-10!2;CL:0000816!1.23e-10!2;CL:0000134!4.18e-08!358;CL:0002320!8.23e-08!365;CL:0000840!8.83e-08!5;CL:0001029!8.83e-08!5;CL:0000817!2.32e-07!3;CL:0000219!8.88e-07!390 | |ontology_enrichment_celltype=CL:0000945!2.16e-76!24;CL:0000826!2.16e-76!24;CL:0000236!2.21e-47!14;CL:0000838!2.87e-36!52;CL:0000542!1.72e-35!53;CL:0000051!1.72e-35!53;CL:0002087!6.09e-34!119;CL:0002031!4.21e-30!124;CL:0000738!7.75e-28!140;CL:0000037!1.09e-24!172;CL:0000566!1.09e-24!172;CL:0002032!2.74e-24!165;CL:0000837!2.74e-24!165;CL:0000988!6.11e-23!182;CL:0000785!1.23e-10!2;CL:0000955!1.23e-10!2;CL:0000818!1.23e-10!2;CL:0000954!1.23e-10!2;CL:0000816!1.23e-10!2;CL:0000134!4.18e-08!358;CL:0002320!8.23e-08!365;CL:0000840!8.83e-08!5;CL:0001029!8.83e-08!5;CL:0000817!2.32e-07!3;CL:0000219!8.88e-07!390 | ||
|ontology_enrichment_celltype_v019=CL:0000945;7.07e-60;24!CL:0000236;2.47e-22;13!CL:0000946;3.25e-19;1!CL:0000786;3.25e-19;1!CL:0000542;5.80e-16;53!CL:0000738;7.18e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.39e-60,24;CL:0000826,6.39e-60,24;CL:0000236,7.42e-32,14;CL:0000838,1.74e-27,52;CL:0000542,5.85e-27,53;CL:0000051,5.85e-27,53;CL:0000946,2.25e-19,1;CL:0000786,2.25e-19,1;CL:0000980,2.25e-19,1;CL:0002087,3.68e-18,115;CL:0002031,2.20e-17,120;CL:0000738,2.78e-15,136;CL:0002032,8.04e-13,161;CL:0000837,8.04e-13,161;CL:0000037,2.92e-12,168;CL:0000988,1.32e-11,177;CL:0000785,2.27e-10,2;CL:0000955,2.27e-10,2;CL:0000818,2.27e-10,2;CL:0000954,2.27e-10,2;CL:0000816,2.27e-10,2;CL:0000817,2.47e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;5.80e-16;53!CL:0000954;2.72e-10;2 | |||
|ontology_enrichment_disease=DOID:0060058!2.45e-16!10 | |ontology_enrichment_disease=DOID:0060058!2.45e-16!10 | ||
|ontology_enrichment_disease_v019=DOID:630;9.81e-20;1!DOID:0050177;9.81e-20;1!DOID:0050427;9.81e-20;1 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.08e-19,1;DOID:0050177,1.08e-19,1;DOID:0050427,1.08e-19,1 | |||
|ontology_enrichment_uberon=UBERON:0002384!2.07e-07!375;UBERON:0002106!4.62e-07!3;UBERON:0004854!4.62e-07!3;UBERON:0009034!4.62e-07!3;UBERON:0002095!4.62e-07!3;UBERON:0004782!4.62e-07!3;UBERON:0003281!4.62e-07!3;UBERON:0009664!4.62e-07!3;UBERON:0002296!4.62e-07!3;UBERON:0005602!4.62e-07!3;UBERON:0001179!4.62e-07!3;UBERON:0006293!4.62e-07!3 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr19:7754043..7754058,- | |short_description=p@chr19:7754043..7754058,- | ||
}} | }} |
Latest revision as of 18:30, 27 July 2015
Short description: | p@chr19:7754043..7754058, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:7754043..7754058, - |
Coexpression cluster: | C36_B_b_splenic_plasma_xeroderma_adrenal_Burkitt |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.39e-60 | 24 |
pro-B cell | 6.39e-60 | 24 |
B cell | 7.42e-32 | 14 |
lymphoid lineage restricted progenitor cell | 1.74e-27 | 52 |
lymphocyte | 5.85e-27 | 53 |
common lymphoid progenitor | 5.85e-27 | 53 |
antibody secreting cell | 2.25e-19 | 1 |
plasma cell | 2.25e-19 | 1 |
plasmablast | 2.25e-19 | 1 |
nongranular leukocyte | 3.68e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 2.20e-17 | 120 |
leukocyte | 2.78e-15 | 136 |
hematopoietic oligopotent progenitor cell | 8.04e-13 | 161 |
hematopoietic multipotent progenitor cell | 8.04e-13 | 161 |
hematopoietic stem cell | 2.92e-12 | 168 |
hematopoietic cell | 1.32e-11 | 177 |
mature B cell | 2.27e-10 | 2 |
pre-B-II cell | 2.27e-10 | 2 |
transitional stage B cell | 2.27e-10 | 2 |
small pre-B-II cell | 2.27e-10 | 2 |
immature B cell | 2.27e-10 | 2 |
precursor B cell | 2.47e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.08e-19 | 1 |
monogenic disease | 1.08e-19 | 1 |
xeroderma pigmentosum | 1.08e-19 | 1 |