FFCP PHASE1:Hg19::chr1:103491839..103491850,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:103491839..103491850,- | |||
|coexpression_cluster_id=C926 | |||
|description=CAGE_peak_at_chr1:103491839..103491850,- | |description=CAGE_peak_at_chr1:103491839..103491850,- | ||
|id=chr1:103491839..103491850,- | |id=chr1:103491839..103491850,- | ||
|ontology_enrichment_celltype=CL:0000055!4.46e-13!180;CL:0000062!7.33e-10!11;CL:0000375!7.33e-10!11;CL:0000335!7.33e-10!11;CL:0000128!2.78e-08!7;CL:0000126!2.78e-08!7;CL:0000127!2.78e-08!7;CL:0002453!2.78e-08!7;CL:0000133!1.66e-07!59;CL:0002580!4.82e-07!3 | |ontology_enrichment_celltype=CL:0000055!4.46e-13!180;CL:0000062!7.33e-10!11;CL:0000375!7.33e-10!11;CL:0000335!7.33e-10!11;CL:0000128!2.78e-08!7;CL:0000126!2.78e-08!7;CL:0000127!2.78e-08!7;CL:0002453!2.78e-08!7;CL:0000133!1.66e-07!59;CL:0002580!4.82e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002617;1.18e-19;2!CL:0002580;2.79e-13;3!CL:0002615;8.35e-13;3!CL:0000136;1.96e-11;13!CL:0002559;2.19e-08;5!CL:0002334;2.19e-07;12!CL:0002569;7.75e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,1.03e-19,2;CL:0002580,2.47e-13,3;CL:0002615,1.27e-12,3;CL:0000136,7.06e-10,15;CL:0002559,2.36e-08,5;CL:0000062,4.85e-08,11;CL:0000375,4.85e-08,11;CL:0000335,4.85e-08,11;CL:0002334,1.98e-07,12;CL:0002569,7.09e-07,6 | |||
|ontology_enrichment_development_v019=CL:0000335;5.60e-08;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3369;3.15e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3369,3.29e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!3.41e-08!6;UBERON:0002358!3.41e-08!6;UBERON:0003684!3.41e-08!6;UBERON:0001178!3.41e-08!6;UBERON:0000488!1.27e-07!4;UBERON:0002200!1.85e-07!11;UBERON:0006876!1.85e-07!11;UBERON:0007625!4.91e-07!11 | |ontology_enrichment_uberon=UBERON:0003688!3.41e-08!6;UBERON:0002358!3.41e-08!6;UBERON:0003684!3.41e-08!6;UBERON:0001178!3.41e-08!6;UBERON:0000488!1.27e-07!4;UBERON:0002200!1.85e-07!11;UBERON:0006876!1.85e-07!11;UBERON:0007625!4.91e-07!11 | ||
|ontology_enrichment_uberon_v019=UBERON:0000310;4.42e-15;10!UBERON:0003688;6.59e-14;6!UBERON:0002358;6.59e-14;6!UBERON:0003684;6.59e-14;6!UBERON:0001178;6.59e-14;6!UBERON:0001443;9.91e-14;11!UBERON:0004457;1.86e-09;9!UBERON:0000042;1.86e-09;9!UBERON:0002073;2.19e-08;5!UBERON:0003422;7.75e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000310,3.89e-15,10;UBERON:0003688,8.06e-14,6;UBERON:0002358,8.06e-14,6;UBERON:0003684,8.06e-14,6;UBERON:0001178,8.06e-14,6;UBERON:0001443,8.84e-14,11;UBERON:0002073,2.36e-08,5;UBERON:0005086,2.36e-08,5;UBERON:0004457,3.58e-07,12;UBERON:0000042,3.58e-07,12;UBERON:0003422,7.09e-07,6 | |||
|phase1_expression=2.72517568905835,5.99481466894753,1.12763523276777,1.0007329835313,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0.286235987131057,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0.795285947051099,4.37971383272372,0.378139268656271,1.10864698731282,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0,0,0,0,0,0,0,0.302714855289863,4.03323147135999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.741800787835671,0,0,0,0,0,0,0,0,0,0.358779271377724,1.49490172172997,0,0,0,0.515281080091258,0.37223371266318,0,0,0,0,0,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,3.21620469096443,0,3.25057549622385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0.285826432630578,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91699884393266,1.14861935834114,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0,0.178428988797162,0,0.117141414992713,1.50473049863859,4.5481500811197,0,0.664225598535437,0.184369168541703,0.260650843404249,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.992431231275107,3.83654933220156,2.52594084989766,0.384417447767103,0.511707249066704,1.60853921143608,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.656029291399411,0,0,0.27470839445503,0.41254749960294,0,0,0,0,0,0.15350367472613,0,0,0.580066775656914,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35012956480441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0.110929051536852,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0,0.464033759878494,0.398095888698616,0.800055529326307,0.343395705182793,0,0,0,0,0,0.453411851024545,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,1.90691047733584,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.863710364874486,0,0,0,2.09234565662625,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,3.71995018166751,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0,0.33639558774184,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=2.72517568905835,5.99481466894753,1.12763523276777,1.0007329835313,0,0.872338524100369,0,0,0,0.245733936501509,0,0,0,0.123766352960047,0,0,0,0,0,0,0.204000691244253,0.313454721478088,0.286235987131057,0.273748850145768,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0.795285947051099,4.37971383272372,0.378139268656271,1.10864698731282,0.614843499851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0,0,0,0,0,0,0,0,0,0,0.302714855289863,4.03323147135999,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0.741800787835671,0,0,0,0,0,0,0,0,0,0.358779271377724,1.49490172172997,0,0,0,0.515281080091258,0.37223371266318,0,0,0,0,0,0.355009592516614,0.201504196455281,0.169560592310488,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,3.21620469096443,0,3.25057549622385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381988425558278,0,0,0,0,0.285826432630578,0.112131084345361,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.91699884393266,1.14861935834114,0,0.289562613335158,0.205476322550383,0,0,0,0,0,0.76228387266739,0,0,0.167516265334349,0,0,0,0,0.36807447515742,0,0,0,0.178428988797162,0,0.117141414992713,1.50473049863859,4.5481500811197,0,0.664225598535437,0.184369168541703,0.260650843404249,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0.992431231275107,3.83654933220156,2.52594084989766,0.384417447767103,0.511707249066704,1.60853921143608,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0,0.256450125116389,0.656029291399411,0,0,0.27470839445503,0.41254749960294,0,0,0,0,0,0.15350367472613,0,0,0.580066775656914,0,0.178064071293475,0,0,0,0,0,0,0,0,0,0,0,0,0.744316738719335,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0.282810863907425,0,0,0,0,0,0,0,0.30982349809975,0,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.35012956480441,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606802608747567,0,0,0,0,0,0,0.140669416410513,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.341826167541004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.160753148465019,0.137539436597234,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.122026264901963,0,0,0.110929051536852,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0,0,0,0,0,0.464033759878494,0.398095888698616,0.800055529326307,0.343395705182793,0,0,0,0,0,0.453411851024545,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0.982829546539238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0.161475645631851,0,0,0,0,0,1.90691047733584,0,0.397832444232549,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.863710364874486,0,0,0,2.09234565662625,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0.436350690340377,0,3.71995018166751,0,0,0.126166424835079,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0.23806443146374,0,0,0.33639558774184,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr1:103491839..103491850,- | |short_description=p@chr1:103491839..103491850,- | ||
}} | }} |
Latest revision as of 19:04, 27 July 2015
Short description: | p@chr1:103491839..103491850, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:103491839..103491850, - |
Coexpression cluster: | C926_Chondrocyte_Adipocyte_tenocyte_Wilms_Preadipocyte_Hair_Fibroblast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 1.03e-19 | 2 |
preadipocyte of the breast | 2.47e-13 | 3 |
adipocyte of omentum tissue | 1.27e-12 | 3 |
fat cell | 7.06e-10 | 15 |
hair follicle cell | 2.36e-08 | 5 |
osteoblast | 4.85e-08 | 11 |
osteoprogenitor cell | 4.85e-08 | 11 |
mesenchyme condensation cell | 4.85e-08 | 11 |
preadipocyte | 1.98e-07 | 12 |
mesenchymal stem cell of umbilical cord | 7.09e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
breast | 3.89e-15 | 10 |
omentum | 8.06e-14 | 6 |
peritoneum | 8.06e-14 | 6 |
abdominal cavity | 8.06e-14 | 6 |
visceral peritoneum | 8.06e-14 | 6 |
chest | 8.84e-14 | 11 |
hair follicle | 2.36e-08 | 5 |
hair follicle placode | 2.36e-08 | 5 |
cavity lining | 3.58e-07 | 12 |
serous membrane | 3.58e-07 | 12 |
mesenchyme of umbilical cord | 7.09e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
peripheral primitive neuroectodermal tumor | 3.29e-10 | 1 |