FFCP PHASE1:Hg19::chr1:10928103..10928127,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:10928103..10928127,- | |||
|coexpression_cluster_id=C732 | |||
|description=CAGE_peak_at_chr1:10928103..10928127,- | |description=CAGE_peak_at_chr1:10928103..10928127,- | ||
|id=chr1:10928103..10928127,- | |id=chr1:10928103..10928127,- | ||
|ontology_enrichment_celltype=CL:0000242!9.25e-08!2;CL:0002319!1.29e-07!25;CL:0000333!3.23e-07!41;CL:0000133!4.98e-07!59 | |ontology_enrichment_celltype=CL:0000242!9.25e-08!2;CL:0002319!1.29e-07!25;CL:0000333!3.23e-07!41;CL:0000133!4.98e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000123;3.61e-34;2!CL:0000242;3.61e-34;2!CL:0000312;1.40e-14;5!CL:0000240;2.19e-12;6!CL:0000311;2.19e-12;6!CL:0000079;2.19e-12;6!CL:0000237;2.19e-12;6!CL:0000362;1.04e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,3.61e-34,2;CL:0000312,1.40e-14,5;CL:0000240,2.19e-12,6;CL:0000311,2.19e-12,6;CL:0000079,2.19e-12,6;CL:0000237,2.19e-12,6;CL:0000036,2.19e-12,6;CL:0000357,2.19e-12,6;CL:0000114,2.19e-12,6;CL:0000362,1.04e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000357;2.19e-12;6!CL:0000114;2.19e-12;6 | |||
|ontology_enrichment_disease=DOID:0050619!8.58e-14!1;DOID:1357!8.58e-14!1;DOID:169!2.35e-09!6;DOID:3119!9.56e-09!14;DOID:1325!4.42e-08!7;DOID:3904!4.42e-08!7;DOID:0050615!1.35e-07!16 | |ontology_enrichment_disease=DOID:0050619!8.58e-14!1;DOID:1357!8.58e-14!1;DOID:169!2.35e-09!6;DOID:3119!9.56e-09!14;DOID:1325!4.42e-08!7;DOID:3904!4.42e-08!7;DOID:0050615!1.35e-07!16 | ||
|ontology_enrichment_disease_v019=DOID:3119;7.13e-20;14 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,7.13e-20,14 | |||
|ontology_enrichment_uberon=UBERON:0001764!8.58e-14!1;UBERON:0001825!8.58e-14!1;UBERON:0002336!2.07e-13!1;UBERON:0001018!2.07e-13!1;UBERON:0002473!2.07e-13!1;UBERON:0005340!2.07e-13!1;UBERON:0002316!2.07e-13!1;UBERON:0003544!2.07e-13!1;UBERON:0001020!2.07e-13!1;UBERON:0005970!2.07e-13!1;UBERON:0002437!2.07e-13!1;UBERON:0000013!4.79e-11!5;UBERON:0002410!4.79e-11!5;UBERON:0001905!1.12e-07!2;UBERON:0002757!1.12e-07!2;UBERON:0010134!1.12e-07!2;UBERON:0002784!1.12e-07!2;UBERON:0005408!1.12e-07!2;UBERON:0001899!1.12e-07!2;UBERON:0005162!2.40e-07!2;UBERON:0000122!2.40e-07!2 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p@chr1:10928103..10928127,- | |short_description=p@chr1:10928103..10928127,- | ||
}} | }} |
Latest revision as of 19:15, 27 July 2015
Short description: | p@chr1:10928103..10928127, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:10928103..10928127, - |
Coexpression cluster: | C732_small_merkel_nonsmall_argyrophil_neuroblastoma_acute_carcinoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 3.61e-34 | 2 |
keratinocyte | 1.40e-14 | 5 |
stratified squamous epithelial cell | 2.19e-12 | 6 |
keratin accumulating cell | 2.19e-12 | 6 |
stratified epithelial cell | 2.19e-12 | 6 |
keratinizing barrier epithelial cell | 2.19e-12 | 6 |
epithelial fate stem cell | 2.19e-12 | 6 |
stratified epithelial stem cell | 2.19e-12 | 6 |
surface ectodermal cell | 2.19e-12 | 6 |
epidermal cell | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 7.13e-20 | 14 |