FFCP PHASE1:Hg19::chr12:4647995..4648087,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:4647995..4648087,+
|short_description=p1@RAD51AP1
|description=CAGE_peak_1_at_RAD51AP1_5end
|association_with_transcript=0bp_to_ENST00000228843,ENST000003...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10635 | |EntrezGene=10635 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16956 | |HGNC=16956 | ||
|TSSclassifier=strong | |||
|UniProt=Q96B01,F5H4V6,F5H031,F5H710,B4DUS5 | |UniProt=Q96B01,F5H4V6,F5H031,F5H710,B4DUS5 | ||
|association_with_transcript=0bp_to_ENST00000228843,ENST00000352618,ENST00000398012,ENST00000442992,ENST00000535558,ENST00000536886,ENST00000538817,ENST00000543041,ENST00000544110_5end | |||
|cluster_id=chr12:4647995..4648087,+ | |||
|coexpression_cluster_id=C109 | |||
|description=CAGE_peak_1_at_RAD51AP1_5end | |||
|id=chr12:4647995..4648087,+ | |||
|ontology_enrichment_celltype=CL:0000066!4.74e-10!254;CL:0000548!8.19e-09!679;CL:0000004!8.19e-09!679;CL:0000255!8.19e-09!679;CL:0000012!1.43e-08!682 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.75e-10,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.53e-61!235;DOID:14566!5.63e-60!239;DOID:0050687!3.26e-33!143;DOID:0050686!1.01e-27!137;DOID:305!2.29e-26!106;DOID:2531!6.91e-21!51;DOID:0060083!6.91e-21!51;DOID:1240!1.41e-16!39;DOID:8692!6.98e-13!31;DOID:3095!3.66e-08!22;DOID:2994!3.66e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.88e-13;39!DOID:2531;3.25e-13;51!DOID:0060083;3.25e-13;51!DOID:8692;1.17e-12;31!DOID:305;1.32e-08;106!DOID:0050687;1.35e-08;143!DOID:3095;4.12e-08;22!DOID:2994;4.12e-08;22!DOID:14566;9.69e-08;239!DOID:0050686;2.28e-07;137!DOID:162;3.34e-07;235 | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.36e-62,235;DOID:14566,3.64e-60,239;DOID:0050687,4.69e-33,143;DOID:0050686,1.18e-27,137;DOID:305,5.27e-26,106;DOID:2531,4.28e-21,51;DOID:0060083,4.28e-21,51;DOID:1240,9.70e-17,39;DOID:8692,5.27e-13,31;DOID:3095,3.11e-08,22;DOID:2994,3.11e-08,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@RAD51AP1 | |||
}} | }} |
Latest revision as of 10:25, 18 September 2015
Short description: | p1@RAD51AP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RAD51AP1_5end |
Coexpression cluster: | C109_Reticulocytes_non_acute_Hodgkin_Burkitt_retinoblastoma_lymphoma |
Association with transcript: | 0bp_to_ENST00000228843, ENST00000352618, ENST00000398012, ENST00000442992, ENST00000535558, ENST00000536886, ENST00000538817, ENST00000543041, ENST00000544110_5end |
EntrezGene: | RAD51AP1 |
HGNC: | 16956 |
UniProt: | Q96B01F5H4V6F5H031F5H710B4DUS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.75e-10 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.36e-62 | 235 |
disease of cellular proliferation | 3.64e-60 | 239 |
cell type cancer | 4.69e-33 | 143 |
organ system cancer | 1.18e-27 | 137 |
carcinoma | 5.27e-26 | 106 |
hematologic cancer | 4.28e-21 | 51 |
immune system cancer | 4.28e-21 | 51 |
leukemia | 9.70e-17 | 39 |
myeloid leukemia | 5.27e-13 | 31 |
germ cell and embryonal cancer | 3.11e-08 | 22 |
germ cell cancer | 3.11e-08 | 22 |