FFCP PHASE1:Hg19::chr3:87040218..87040229,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=389136 | |EntrezGene=389136 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24327 | |HGNC=24327 | ||
|TSSclassifier=strong | |||
|UniProt=A8MV65 | |UniProt=A8MV65 | ||
|association_with_transcript=27bp_to_ENST00000398399,NM_016206,uc003dqn.2_5end | |association_with_transcript=27bp_to_ENST00000398399,NM_016206,uc003dqn.2_5end | ||
|cluster_id=chr3:87040218..87040229,- | |||
|coexpression_cluster_id=C2757 | |||
|description=CAGE_peak_8_at_VGLL3_5end | |description=CAGE_peak_8_at_VGLL3_5end | ||
|id=chr3:87040218..87040229,- | |id=chr3:87040218..87040229,- | ||
|ontology_enrichment_celltype=CL:0000057!2.67e-16!75;CL:0000055!9.84e-15!180;CL:0000548!2.54e-08!679;CL:0000004!2.54e-08!679;CL:0000255!2.54e-08!679;CL:0002620!4.76e-08!23;CL:0000012!6.58e-08!682 | |ontology_enrichment_celltype=CL:0000057!2.67e-16!75;CL:0000055!9.84e-15!180;CL:0000548!2.54e-08!679;CL:0000004!2.54e-08!679;CL:0000255!2.54e-08!679;CL:0002620!4.76e-08!23;CL:0000012!6.58e-08!682 | ||
|ontology_enrichment_celltype_v019=CL:0000349;3.25e-14;19!CL:0000134;8.74e-10;55!CL:0002559;1.69e-08;5!CL:0000048;1.14e-07;58!CL:0002537;2.54e-07;5!CL:0000723;3.01e-07;61!CL:0002620;7.54e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.98e-14,19;CL:0000057,2.41e-10,76;CL:0002559,2.26e-08,5;CL:0002537,2.46e-07,5;CL:0002620,6.02e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004923!3.97e-11!57;UBERON:0003102!5.30e-11!95;UBERON:0000478!1.82e-10!24;UBERON:0005631!4.87e-10!14;UBERON:0000158!4.87e-10!14;UBERON:0002199!6.54e-08!45;UBERON:0002416!6.54e-08!45;UBERON:0000914!1.37e-07!83;UBERON:0002329!1.37e-07!83;UBERON:0003077!1.37e-07!83;UBERON:0003059!1.37e-07!83;UBERON:0007282!1.37e-07!83;UBERON:0009618!1.37e-07!83;UBERON:0007285!1.37e-07!83;UBERON:0002200!7.19e-07!11;UBERON:0006876!7.19e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;5.99e-14;10!UBERON:0000158;5.99e-14;10!UBERON:0000478;6.91e-14;24!UBERON:0000305;1.44e-09;7!UBERON:0006876;5.35e-09;11!UBERON:0002073;1.69e-08;5!UBERON:0005284;2.71e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.27e-16,14;UBERON:0000158,2.27e-16,14;UBERON:0000478,9.83e-14,24;UBERON:0004923,1.67e-11,66;UBERON:0000305,1.53e-09,7;UBERON:0006876,2.73e-09,11;UBERON:0003124,1.76e-08,7;UBERON:0002073,2.26e-08,5;UBERON:0005086,2.26e-08,5;UBERON:0004871,3.48e-08,8;UBERON:0002199,3.48e-08,46;UBERON:0002416,3.48e-08,46;UBERON:0003102,4.98e-08,99;UBERON:0002097,1.12e-07,41;UBERON:0005284,1.80e-07,5 | |||
|phase1_expression=0.908391896352783,1.07050261945492,3.52386010239928,3.00219895059391,0.893922188854576,0.872338524100369,2.53299878168311,0.631719873426831,1.56711376919903,0.982935746006035,0,2.40285509343189,1.31883489114227,0.74259811776028,1.65698687863958,0.672325146451775,0,0.730310090387373,0.487932798790507,0.246242116153576,2.24400760368678,0.626909442956176,0.286235987131057,0.136874425072884,0.627713197974014,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0,0,0.434539556882471,0,0,1.79616152611729,1.99556457716308,2.45937399940753,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,0,0,0,0,0,0.17859945656816,0,0.225222960966644,0,0,0,0,0,0.436094052142534,1.49091585508596,0,1.19168262731897,0.860509862246441,0.709336764396714,0,1.06748995729705,0,1.24484414159907,0.67355336034844,0.326923806226917,1.51357427644931,1.15235184896,0.234321431833797,0.936480230490962,0,1.64393548606981,0.23486899728753,0.809364721840658,0,0.816616685019573,0.737005903870608,1.34323515528495,1.18800285728205,1.97813543422845,0,0,0.336672227908132,0.250237039743928,2.21651292387346,2.63386572528503,2.45190236639216,2.85452311922534,0.453728732640084,1.07633781413317,4.05759038755278,3.39091041855299,0.600182192168805,3.19462840639161,1.8034837803194,2.23340227597908,0.337552664482532,0.974370051611986,0.757301322732344,3.77404584433427,1.77810662500693,0.710019185033229,1.30977727695932,1.52604533079439,0.386521706326594,0.272746120590835,0.573609190778008,0,0.132529768321485,0,0.10366105501537,0.504641701751257,0,3.12899064659632,7.71889125831462,1.38134921352481,5.10804720835177,2.16563844500876,1.0647612003586,1.18009283054671,0.723033089650446,0.55146986366197,0.435758888184812,0.949082476444386,0.404493924480493,0.588664395376038,0,0,0,0.4115740113314,0,0,0,0,0,0.491953754172454,0.514703430895577,0.109750285408626,0,0,0,0.325808305310325,1.03993478527958,0,0,2.58299127318808,0,0,0,0,0,0,0,0,0,0.335964256397719,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0.063497894292169,0,0,1.71072446022705,0,0,0,1.68196626518041,2.61576041299968,1.6134422880609,1.16344544182,3.57656445851882,0,1.86156681609409,1.04007436911366,0.257207374262142,1.41849132023278,1.3321108950805,2.00169191121407,0.542621605391443,0.823240336780769,0,0.710783897485092,0,0.301439377059586,0,0.699810938274399,0,0,0,1.4377491329495,1.14861935834114,0,1.73737568001095,0.410952645100767,1.61154866915906,0,0,0,0,0.76228387266739,1.30139853857622,0,0,0,0,0,0,0.981531933753119,0,1.08506009479894,4.15941723061614,2.3195768543631,3.78485796081443,1.52283839490527,1.50473049863859,0,3.10419213877515,1.99267679560631,0.553107505625109,2.08520674723399,0.783204629850962,1.02943027143257,0,0,0,1.5156378572313,3.32870879020994,0.604780586659361,0.992431231275107,1.2276957863045,0.841980283299221,2.81906128362542,2.04682899626681,0.965123526861645,1.48418066444991,0.771048469013278,0.532685175939381,0.164254312027618,0,0.697262270759755,0.120859449591622,0.601519410909855,0.184161977871793,0.114814448164607,0.182091168006717,0.131124414959424,0.451199612907412,1.07821471946181,0,1.46139224653261,0.316654886678627,0,0,0.215915916102139,1.54227252690289,0,0,0.254876273045038,0,0,0,0,0,0.328014645699706,0,3.40035338437484,0,0,0.574265537996172,0,0,0.48335359146061,0.308097234229289,0.921022048356777,0.827019434907183,0.966782203814463,0.145016693914229,0.852266274161009,0.534192213880424,0,0.384380134730212,0.382838137483752,0.30347334256665,0,0,0,0,0.532306030317022,0,0.18532421910392,0.143124886741991,2.60510858551767,1.89827654831236,4.5751246541718,0,0.855877976067841,0.636406495851874,0,1.97859703341646,0.54907405947211,1.06031162111118,0,0,0.842516912477962,0.975267478179181,0.243713489631284,0,0.682499557039929,0.424216295861138,1.13008116620243,0.551365343546124,0,0.438450885253763,0,1.31178950409327,0.811641507850816,0.30982349809975,0,0,1.17898849215745,0.7133421029625,0,2.11107635297664,3.62224382255892,0.379473173765715,1.04980416073495,0,0,0,3.76575203107117,0.86101074534246,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0.121360521749513,0.557216921387392,0,5.49112314896687,1.48482340416319,2.45728561679386,0,0,0.111308705022906,0.329607748453519,0,0.398495976502139,0.276283915531148,0,0.102268682502155,0,2.79935628895627,0.359473404589307,0,0,0.197286811273867,0,4.44547960578548,0,0.0927680981618513,0,0,0,0,0,0,22.456829767954,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0.384751292518985,2.05095700524602,0.46112780877612,0,0.108647371922008,4.78501739597879,2.28993983504656,6.92945208824225,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,0.353830258013357,0,1.48260564340311,0.494255755786011,0.313265848516366,0.067401132980677,0,0,0,0,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,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| ||
|short_description=p8@VGLL3 | |short_description=p8@VGLL3 | ||
}} | }} |
Latest revision as of 18:24, 19 September 2015
Short description: | p8@VGLL3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_VGLL3_5end |
Coexpression cluster: | C2757_bronchogenic_placenta_small_oral_bone_Hair_chorionic |
Association with transcript: | 27bp_to_ENST00000398399, NM_016206, uc003dqn.2_5end |
EntrezGene: | VGLL3 |
HGNC: | 24327 |
UniProt: | A8MV65 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.98e-14 | 19 |
fibroblast | 2.41e-10 | 76 |
hair follicle cell | 2.26e-08 | 5 |
amnion mesenchymal stem cell | 2.46e-07 | 5 |
skin fibroblast | 6.02e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.27e-16 | 14 |
membranous layer | 2.27e-16 | 14 |
extraembryonic structure | 9.83e-14 | 24 |
organ component layer | 1.67e-11 | 66 |
amnion | 1.53e-09 | 7 |
vasculature of organ | 2.73e-09 | 11 |
chorion | 1.76e-08 | 7 |
hair follicle | 2.26e-08 | 5 |
hair follicle placode | 2.26e-08 | 5 |
somatic layer of lateral plate mesoderm | 3.48e-08 | 8 |
integument | 3.48e-08 | 46 |
integumental system | 3.48e-08 | 46 |
surface structure | 4.98e-08 | 99 |
skin of body | 1.12e-07 | 41 |
brain vasculature | 1.80e-07 | 5 |