FFCP PHASE1:Hg19::chr1:152975569..152975582,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:152975569..152975582,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr1:152975569..152975582,- | |description=CAGE_peak_at_chr1:152975569..152975582,- | ||
|id=chr1:152975569..152975582,- | |id=chr1:152975569..152975582,- | ||
|ontology_enrichment_celltype=CL:0002537!1.80e-19!5 | |ontology_enrichment_celltype=CL:0002537!1.80e-19!5 | ||
|ontology_enrichment_celltype_v019=CL:0002537;1.31e-16;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002537,1.21e-16,5 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.53e-21;1!UBERON:0008814;2.47e-11;2!UBERON:0010056;2.47e-11;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!7.44e-22!2;UBERON:0001723!2.42e-15!3;UBERON:0001033!2.42e-15!3;UBERON:0010056!2.42e-15!3;UBERON:0000305!4.35e-14!7;UBERON:0000166!1.57e-12!21;UBERON:0004871!2.12e-12!8;UBERON:0005631!3.40e-12!14;UBERON:0000158!3.40e-12!14;UBERON:0002372!4.06e-12!1;UBERON:0001961!4.06e-12!1;UBERON:0001744!4.06e-12!1;UBERON:0001735!4.06e-12!1;UBERON:0001004!1.32e-10!72;UBERON:0000161!1.73e-10!35;UBERON:0001042!2.83e-10!10;UBERON:0009145!2.83e-10!10;UBERON:0000078!9.93e-10!18;UBERON:0006562!2.18e-09!11;UBERON:0000165!2.27e-09!28;UBERON:0000930!2.27e-09!28;UBERON:0000065!4.81e-09!53;UBERON:0000478!3.43e-07!24;UBERON:0003126!6.78e-07!7;UBERON:0001005!6.78e-07!7;UBERON:0000341!9.44e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.08e-27;3!UBERON:0001033;2.08e-27;3!UBERON:0002372;2.82e-21;1!UBERON:0005795;2.82e-21;1!UBERON:0001961;2.82e-21;1!UBERON:0001744;2.82e-21;1!UBERON:0001042;2.82e-21;1!UBERON:0001735;2.82e-21;1!UBERON:0000305;3.74e-12;7!UBERON:0000341;2.02e-11;2!UBERON:0006562;2.47e-11;2!UBERON:0003127;4.09e-11;2!UBERON:0005631;8.62e-09;10!UBERON:0000158;8.62e-09;10!UBERON:0001043;4.52e-08;3!UBERON:0000165;4.93e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.82e-27,3;UBERON:0001033,1.82e-27,3;UBERON:0010056,1.82e-27,3;UBERON:0002372,3.45e-21,1;UBERON:0001961,3.45e-21,1;UBERON:0001744,3.45e-21,1;UBERON:0001735,3.45e-21,1;UBERON:0001042,1.44e-18,10;UBERON:0009145,1.44e-18,10;UBERON:0006562,6.02e-17,11;UBERON:0000305,3.53e-12,7;UBERON:0000341,2.02e-11,2;UBERON:0003127,4.52e-11,2;UBERON:0004871,8.90e-11,8;UBERON:0001557,4.30e-10,19;UBERON:0000166,8.47e-09,22;UBERON:0001043,4.52e-08,3;UBERON:0009143,4.52e-08,3;UBERON:0000072,4.27e-07,47;UBERON:0000165,8.26e-07,29;UBERON:0000930,8.26e-07,29 | |||
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|short_description=p@chr1:152975569..152975582,- | |short_description=p@chr1:152975569..152975582,- | ||
}} | }} |
Latest revision as of 21:37, 27 July 2015
Short description: | p@chr1:152975569..152975582, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:152975569..152975582, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
amnion mesenchymal stem cell | 1.21e-16 | 5 |
Ontology term | p-value | n |
---|---|---|
tongue | 1.82e-27 | 3 |
gustatory system | 1.82e-27 | 3 |
future tongue | 1.82e-27 | 3 |
tonsil | 3.45e-21 | 1 |
mucosa-associated lymphoid tissue | 3.45e-21 | 1 |
lymphoid tissue | 3.45e-21 | 1 |
tonsillar ring | 3.45e-21 | 1 |
chordate pharynx | 1.44e-18 | 10 |
pharyngeal region of foregut | 1.44e-18 | 10 |
pharynx | 6.02e-17 | 11 |
amnion | 3.53e-12 | 7 |
throat | 2.02e-11 | 2 |
open tracheal system trachea | 4.52e-11 | 2 |
somatic layer of lateral plate mesoderm | 8.90e-11 | 8 |
upper respiratory tract | 4.30e-10 | 19 |
oral opening | 8.47e-09 | 22 |
esophagus | 4.52e-08 | 3 |
esophageal region | 4.52e-08 | 3 |
segment of respiratory tract | 4.27e-07 | 47 |
mouth | 8.26e-07 | 29 |
stomodeum | 8.26e-07 | 29 |