FFCP PHASE1:Hg19::chr1:152975595..152975603,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=99bp_to_AB587575_5end | |association_with_transcript=99bp_to_AB587575_5end | ||
|cluster_id=chr1:152975595..152975603,+ | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_8_at_AB587575_5end | |description=CAGE_peak_8_at_AB587575_5end | ||
|id=chr1:152975595..152975603,+ | |id=chr1:152975595..152975603,+ | ||
|ontology_enrichment_celltype=CL:0002537!1.86e-20!5;CL:0002623!1.22e-15!3;CL:0000622!9.28e-10!5;CL:0002076!8.96e-09!43;CL:0000154!2.81e-08!6;CL:0002368!4.09e-08!13 | |ontology_enrichment_celltype=CL:0002537!1.86e-20!5;CL:0002623!1.22e-15!3;CL:0000622!9.28e-10!5;CL:0002076!8.96e-09!43;CL:0000154!2.81e-08!6;CL:0002368!4.09e-08!13 | ||
|ontology_enrichment_celltype_v019=CL:0002623;3.24e-12;3!CL:0000622;7.49e-08;5!CL:0000154;9.49e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,3.24e-12,3;CL:0000622,7.49e-08,5;CL:0000154,9.49e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0009143;1.84e-34;1!UBERON:0008814;8.34e-18;2!UBERON:0010056;8.34e-18;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001723!3.98e-16!3;UBERON:0001033!3.98e-16!3;UBERON:0010056!3.98e-16!3;UBERON:0000078!1.66e-15!18;UBERON:0000305!8.50e-15!7;UBERON:0000166!2.78e-13!21;UBERON:0004871!5.05e-13!8;UBERON:0002372!9.92e-13!1;UBERON:0001961!9.92e-13!1;UBERON:0001744!9.92e-13!1;UBERON:0001735!9.92e-13!1;UBERON:0000989!2.75e-12!1;UBERON:0008811!2.75e-12!1;UBERON:0006258!2.75e-12!1;UBERON:0005876!2.75e-12!1;UBERON:0004874!2.75e-12!1;UBERON:0001004!2.43e-11!72;UBERON:0000161!4.21e-11!35;UBERON:0001042!8.09e-11!10;UBERON:0009145!8.09e-11!10;UBERON:0000165!6.12e-10!28;UBERON:0000930!6.12e-10!28;UBERON:0006562!6.97e-10!11;UBERON:0000065!1.25e-09!53;UBERON:0000072!2.30e-08!46;UBERON:0001044!2.81e-08!6;UBERON:0003293!2.81e-08!6;UBERON:0003294!2.81e-08!6;UBERON:0010047!2.81e-08!6;UBERON:0000167!2.81e-08!6;UBERON:0001041!4.32e-08!98;UBERON:0005631!1.14e-07!14;UBERON:0000158!1.14e-07!14;UBERON:0007196!1.25e-07!14;UBERON:0001558!1.25e-07!14;UBERON:0000077!3.29e-07!130;UBERON:0004921!3.29e-07!129;UBERON:0004185!3.29e-07!129;UBERON:0003126!3.79e-07!7;UBERON:0001005!3.79e-07!7;UBERON:0000341!7.20e-07!2;UBERON:0003127!7.61e-07!2 | |ontology_enrichment_uberon=UBERON:0001723!3.98e-16!3;UBERON:0001033!3.98e-16!3;UBERON:0010056!3.98e-16!3;UBERON:0000078!1.66e-15!18;UBERON:0000305!8.50e-15!7;UBERON:0000166!2.78e-13!21;UBERON:0004871!5.05e-13!8;UBERON:0002372!9.92e-13!1;UBERON:0001961!9.92e-13!1;UBERON:0001744!9.92e-13!1;UBERON:0001735!9.92e-13!1;UBERON:0000989!2.75e-12!1;UBERON:0008811!2.75e-12!1;UBERON:0006258!2.75e-12!1;UBERON:0005876!2.75e-12!1;UBERON:0004874!2.75e-12!1;UBERON:0001004!2.43e-11!72;UBERON:0000161!4.21e-11!35;UBERON:0001042!8.09e-11!10;UBERON:0009145!8.09e-11!10;UBERON:0000165!6.12e-10!28;UBERON:0000930!6.12e-10!28;UBERON:0006562!6.97e-10!11;UBERON:0000065!1.25e-09!53;UBERON:0000072!2.30e-08!46;UBERON:0001044!2.81e-08!6;UBERON:0003293!2.81e-08!6;UBERON:0003294!2.81e-08!6;UBERON:0010047!2.81e-08!6;UBERON:0000167!2.81e-08!6;UBERON:0001041!4.32e-08!98;UBERON:0005631!1.14e-07!14;UBERON:0000158!1.14e-07!14;UBERON:0007196!1.25e-07!14;UBERON:0001558!1.25e-07!14;UBERON:0000077!3.29e-07!130;UBERON:0004921!3.29e-07!129;UBERON:0004185!3.29e-07!129;UBERON:0003126!3.79e-07!7;UBERON:0001005!3.79e-07!7;UBERON:0000341!7.20e-07!2;UBERON:0003127!7.61e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.22e-44;3!UBERON:0001033;1.22e-44;3!UBERON:0002372;4.27e-34;1!UBERON:0005795;4.27e-34;1!UBERON:0001961;4.27e-34;1!UBERON:0001744;4.27e-34;1!UBERON:0001042;4.27e-34;1!UBERON:0001735;4.27e-34;1!UBERON:0000165;2.39e-19;28!UBERON:0006562;8.34e-18;2!UBERON:0001043;1.85e-12;3!UBERON:0001041;1.90e-10;14!UBERON:0001555;1.02e-09;54!UBERON:0004921;9.36e-09;33!UBERON:0002050;6.34e-08;5!UBERON:0005423;6.34e-08;5!UBERON:0000161;6.48e-08;19!UBERON:0000166;6.48e-08;19!UBERON:0000033;2.30e-07;50!UBERON:0001044;9.49e-07;6!UBERON:0003293;9.49e-07;6!UBERON:0003294;9.49e-07;6!UBERON:0010047;9.49e-07;6!UBERON:0003408;9.49e-07;6!UBERON:0000167;9.49e-07;6!UBERON:0000020;9.95e-07;23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.53e-44,3;UBERON:0001033,1.53e-44,3;UBERON:0010056,1.53e-44,3;UBERON:0002372,5.05e-34,1;UBERON:0001961,5.05e-34,1;UBERON:0001744,5.05e-34,1;UBERON:0001735,5.05e-34,1;UBERON:0001042,3.07e-30,10;UBERON:0009145,3.07e-30,10;UBERON:0006562,1.40e-27,11;UBERON:0000166,2.18e-24,22;UBERON:0000165,1.12e-18,29;UBERON:0000930,1.12e-18,29;UBERON:0001557,2.39e-16,19;UBERON:0000161,3.57e-15,36;UBERON:0001043,1.85e-12,3;UBERON:0009143,1.85e-12,3;UBERON:0001444,2.61e-11,49;UBERON:0000033,5.77e-10,56;UBERON:0001041,6.24e-10,87;UBERON:0000153,4.72e-09,62;UBERON:0007811,4.72e-09,62;UBERON:0008814,2.51e-08,18;UBERON:0001004,1.15e-07,74;UBERON:0004921,2.32e-07,118;UBERON:0000072,4.79e-07,47;UBERON:0001044,9.49e-07,6;UBERON:0003293,9.49e-07,6;UBERON:0003294,9.49e-07,6;UBERON:0010047,9.49e-07,6;UBERON:0000167,9.49e-07,6 | |||
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|short_description=p8@AB587575 | |short_description=p8@AB587575 | ||
}} | }} |
Latest revision as of 21:37, 27 July 2015
Short description: | p8@AB587575 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_AB587575_5end |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | 99bp_to_AB587575_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 3.24e-12 | 3 |
acinar cell | 7.49e-08 | 5 |
protein secreting cell | 9.49e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
tongue | 1.53e-44 | 3 |
gustatory system | 1.53e-44 | 3 |
future tongue | 1.53e-44 | 3 |
tonsil | 5.05e-34 | 1 |
mucosa-associated lymphoid tissue | 5.05e-34 | 1 |
lymphoid tissue | 5.05e-34 | 1 |
tonsillar ring | 5.05e-34 | 1 |
chordate pharynx | 3.07e-30 | 10 |
pharyngeal region of foregut | 3.07e-30 | 10 |
pharynx | 1.40e-27 | 11 |
oral opening | 2.18e-24 | 22 |
mouth | 1.12e-18 | 29 |
stomodeum | 1.12e-18 | 29 |
upper respiratory tract | 2.39e-16 | 19 |
orifice | 3.57e-15 | 36 |
esophagus | 1.85e-12 | 3 |
esophageal region | 1.85e-12 | 3 |
subdivision of head | 2.61e-11 | 49 |
head | 5.77e-10 | 56 |
foregut | 6.24e-10 | 87 |
anterior region of body | 4.72e-09 | 62 |
craniocervical region | 4.72e-09 | 62 |
pharyngeal arch system | 2.51e-08 | 18 |
respiratory system | 1.15e-07 | 74 |
subdivision of digestive tract | 2.32e-07 | 118 |
segment of respiratory tract | 4.79e-07 | 47 |
saliva-secreting gland | 9.49e-07 | 6 |
gland of oral region | 9.49e-07 | 6 |
gland of foregut | 9.49e-07 | 6 |
oral gland | 9.49e-07 | 6 |
oral cavity | 9.49e-07 | 6 |