FFCP PHASE1:Hg19::chr1:154926344..154926365,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57326 | |EntrezGene=57326 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21199 | |HGNC=21199 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-111bp_to_ENST00000493133,ENST00000498553_5end | |association_with_transcript=-111bp_to_ENST00000493133,ENST00000498553_5end | ||
|cluster_id=chr1:154926344..154926365,- | |||
|coexpression_cluster_id=C146 | |||
|description=CAGE_peak_4_at_PBXIP1_5end | |description=CAGE_peak_4_at_PBXIP1_5end | ||
|id=chr1:154926344..154926365,- | |id=chr1:154926344..154926365,- | ||
|ontology_enrichment_celltype=CL:0000945!1.21e-17!24;CL:0000826!1.21e-17!24;CL:0000542!1.01e-14!53;CL:0000051!1.01e-14!53;CL:0000838!2.79e-13!52;CL:0000990!3.59e-08!8;CL:0000738!3.87e-07!140;CL:0002087!8.89e-07!119 | |ontology_enrichment_celltype=CL:0000945!1.21e-17!24;CL:0000826!1.21e-17!24;CL:0000542!1.01e-14!53;CL:0000051!1.01e-14!53;CL:0000838!2.79e-13!52;CL:0000990!3.59e-08!8;CL:0000738!3.87e-07!140;CL:0002087!8.89e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000453;3.37e-14;5!CL:0000990;2.65e-08;8!CL:0000451;5.98e-07;10!CL:0000945;7.62e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,3.15e-14,5;CL:0000990,2.55e-08,8;CL:0000451,5.81e-07,10;CL:0000945,7.46e-07,24;CL:0000826,7.46e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:12603;1.33e-17;1!DOID:0060058;1.06e-15;10 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,1.44e-17,1;DOID:0060058,1.06e-15,10 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,8.15e-07,3;UBERON:0004854,8.15e-07,3;UBERON:0009034,8.15e-07,3;UBERON:0002095,8.15e-07,3;UBERON:0004782,8.15e-07,3;UBERON:0003281,8.15e-07,3;UBERON:0009664,8.15e-07,3;UBERON:0002296,8.15e-07,3;UBERON:0005602,8.15e-07,3;UBERON:0001179,8.15e-07,3;UBERON:0006293,8.15e-07,3 | |||
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| ||
|short_description=p4@PBXIP1 | |short_description=p4@PBXIP1 | ||
}} | }} |
Latest revision as of 10:26, 17 September 2015
Short description: | p4@PBXIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PBXIP1_5end |
Coexpression cluster: | C146_lymphangiectasia_lymphoma_gall_lymph_tonsil_gastric_transitionalcell |
Association with transcript: | -111bp_to_ENST00000493133, ENST00000498553_5end |
EntrezGene: | PBXIP1 |
HGNC: | 21199 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 3.15e-14 | 5 |
conventional dendritic cell | 2.55e-08 | 8 |
dendritic cell | 5.81e-07 | 10 |
lymphocyte of B lineage | 7.46e-07 | 24 |
pro-B cell | 7.46e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
spleen | 8.15e-07 | 3 |
gastrointestinal system mesentery | 8.15e-07 | 3 |
stomach region | 8.15e-07 | 3 |
mesentery | 8.15e-07 | 3 |
gastrointestinal system serosa | 8.15e-07 | 3 |
mesentery of stomach | 8.15e-07 | 3 |
gut mesentery | 8.15e-07 | 3 |
dorsal mesentery | 8.15e-07 | 3 |
dorsal mesogastrium | 8.15e-07 | 3 |
peritoneal cavity | 8.15e-07 | 3 |
spleen primordium | 8.15e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 1.44e-17 | 1 |
lymphoma | 1.06e-15 | 10 |