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FFCP PHASE1:Hg19::chr1:155294342..155294353,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=23623
|EntrezGene=23623
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=17153
|HGNC=17153
|TSSclassifier=strong
|UniProt=
|UniProt=
|association_with_transcript=12bp_to_ENST00000471876_5end
|association_with_transcript=12bp_to_ENST00000471876_5end
|cluster_id=chr1:155294342..155294353,+
|description=CAGE_peak_4_at_RUSC1_5end
|description=CAGE_peak_4_at_RUSC1_5end
|id=chr1:155294342..155294353,+
|id=chr1:155294342..155294353,+
|ontology_enrichment_celltype=CL:0000066!1.79e-30!254;CL:0002321!1.30e-20!248;CL:0000220!3.11e-20!246;CL:0000548!1.95e-17!679;CL:0000004!1.95e-17!679;CL:0000255!1.95e-17!679;CL:0000012!5.28e-17!682;CL:0000055!2.13e-10!180;CL:0000222!2.78e-10!119;CL:0002076!1.59e-09!43;CL:0000003!7.75e-09!722;CL:0000223!2.32e-08!59;CL:1000497!3.17e-08!18;CL:0002518!3.17e-08!18;CL:0002368!1.76e-07!13;CL:1000449!2.24e-07!16;CL:0000076!3.07e-07!62;CL:0000144!3.29e-07!625;CL:0000063!3.91e-07!578
|ontology_enrichment_celltype=CL:0000066!1.79e-30!254;CL:0002321!1.30e-20!248;CL:0000220!3.11e-20!246;CL:0000548!1.95e-17!679;CL:0000004!1.95e-17!679;CL:0000255!1.95e-17!679;CL:0000012!5.28e-17!682;CL:0000055!2.13e-10!180;CL:0000222!2.78e-10!119;CL:0002076!1.59e-09!43;CL:0000003!7.75e-09!722;CL:0000223!2.32e-08!59;CL:1000497!3.17e-08!18;CL:0002518!3.17e-08!18;CL:0002368!1.76e-07!13;CL:1000449!2.24e-07!16;CL:0000076!3.07e-07!62;CL:0000144!3.29e-07!625;CL:0000063!3.91e-07!578
|ontology_enrichment_celltype_v019=CL:1000497;2.80e-11;17!CL:0002518;2.80e-11;17!CL:1000449;5.27e-10;15!CL:0002368;2.20e-09;13!CL:0002681;3.40e-09;12!CL:0002584;3.40e-09;12!CL:0002076;4.58e-07;42!CL:1000507;4.83e-07;10!CL:1000494;4.83e-07;10
|ontology_enrichment_celltype_v019_2=CL:0000066,5.93e-21,253;CL:1000497,1.68e-11,17;CL:0002518,1.68e-11,17;CL:1000449,5.06e-10,15;CL:0002368,1.36e-09,13;CL:0002681,3.87e-09,12;CL:0002584,3.87e-09,12;CL:0002076,9.90e-09,42;CL:0002321,1.43e-08,250;CL:1000507,3.24e-07,10;CL:1000494,3.24e-07,10;CL:0000223,6.75e-07,58
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=DOID:305!1.03e-10!106;DOID:0050687!2.50e-10!143
|ontology_enrichment_disease_v019=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003104!1.05e-12!238;UBERON:0009142!1.05e-12!238;UBERON:0006554!1.22e-11!44;UBERON:0001008!6.50e-11!45;UBERON:0002100!7.91e-11!216;UBERON:0005256!1.73e-10!143;UBERON:0004119!2.19e-10!169;UBERON:0000925!2.19e-10!169;UBERON:0006595!2.19e-10!169;UBERON:0003102!4.46e-09!95;UBERON:0003064!2.25e-08!37;UBERON:0000058!1.54e-07!26;UBERON:0000486!1.58e-07!82;UBERON:0000481!2.03e-07!347;UBERON:0001007!2.11e-07!155;UBERON:0001555!2.11e-07!155;UBERON:0007026!2.11e-07!155;UBERON:0004211!2.24e-07!16;UBERON:0001285!2.24e-07!16;UBERON:0007684!2.24e-07!16;UBERON:0003220!2.24e-07!16;UBERON:0004208!2.24e-07!16;UBERON:0000490!2.94e-07!138;UBERON:0000475!6.32e-07!365;UBERON:0004876!7.01e-07!20
|ontology_enrichment_uberon=UBERON:0003104!1.05e-12!238;UBERON:0009142!1.05e-12!238;UBERON:0006554!1.22e-11!44;UBERON:0001008!6.50e-11!45;UBERON:0002100!7.91e-11!216;UBERON:0005256!1.73e-10!143;UBERON:0004119!2.19e-10!169;UBERON:0000925!2.19e-10!169;UBERON:0006595!2.19e-10!169;UBERON:0003102!4.46e-09!95;UBERON:0003064!2.25e-08!37;UBERON:0000058!1.54e-07!26;UBERON:0000486!1.58e-07!82;UBERON:0000481!2.03e-07!347;UBERON:0001007!2.11e-07!155;UBERON:0001555!2.11e-07!155;UBERON:0007026!2.11e-07!155;UBERON:0004211!2.24e-07!16;UBERON:0001285!2.24e-07!16;UBERON:0007684!2.24e-07!16;UBERON:0003220!2.24e-07!16;UBERON:0004208!2.24e-07!16;UBERON:0000490!2.94e-07!138;UBERON:0000475!6.32e-07!365;UBERON:0004876!7.01e-07!20
|ontology_enrichment_uberon_v019=UBERON:0006554;3.15e-11;30!UBERON:0001008;3.15e-11;30!UBERON:0006555;5.27e-10;15!UBERON:0004819;5.27e-10;15!UBERON:0001285;5.27e-10;15!UBERON:0007684;5.27e-10;15!UBERON:0001225;3.40e-09;12!UBERON:0008987;3.40e-09;12!UBERON:0002113;7.07e-09;24!UBERON:0011143;7.07e-09;24!UBERON:0000353;4.47e-08;15!UBERON:0000489;1.16e-07;29!UBERON:0004211;4.83e-07;10!UBERON:0009773;4.83e-07;10!UBERON:0001231;4.83e-07;10!UBERON:0004810;4.83e-07;10!UBERON:0001851;9.09e-07;15
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|short_description=p4@RUSC1
|short_description=p4@RUSC1
}}
}}

Latest revision as of 12:42, 17 September 2015

Short description:p4@RUSC1
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_4_at_RUSC1_5end
Coexpression cluster:NA
Association with transcript: 12bp_to_ENST00000471876_5end
EntrezGene:RUSC1
HGNC: 17153
UniProt: NA
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data