FFCP PHASE1:Hg19::chr12:53200600..53200613,-: Difference between revisions
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|id=chr12:53200600..53200613,-
|short_description=p@chr12:53200600..53200613,-
|description=CAGE_peak_at_chr12:53200600..53200613,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:53200600..53200613,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr12:53200600..53200613,- | |||
|id=chr12:53200600..53200613,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;2.21e-40;1!UBERON:0008814;4.66e-21;2!UBERON:0010056;4.66e-21;2 | |||
|ontology_enrichment_disease=DOID:178!4.53e-12!1;DOID:326!4.53e-12!1;DOID:3978!4.53e-12!1;DOID:3394!4.53e-12!1;DOID:5844!4.53e-12!1;DOID:3151!5.62e-12!1;DOID:3149!5.62e-12!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000341!3.53e-22!2;UBERON:0003127!8.27e-22!2;UBERON:0001723!1.82e-15!3;UBERON:0001033!1.82e-15!3;UBERON:0010056!1.82e-15!3;UBERON:0000166!1.33e-12!21;UBERON:0002372!4.06e-12!1;UBERON:0001961!4.06e-12!1;UBERON:0001744!4.06e-12!1;UBERON:0001735!4.06e-12!1;UBERON:0001042!2.49e-10!10;UBERON:0009145!2.49e-10!10;UBERON:0000974!5.28e-10!10;UBERON:0000078!8.09e-10!18;UBERON:0006562!1.95e-09!11;UBERON:0000165!2.00e-09!28;UBERON:0000930!2.00e-09!28;UBERON:0001004!1.89e-08!72;UBERON:0000002!6.16e-08!6;UBERON:0001560!6.16e-08!6;UBERON:0000072!6.60e-08!46;UBERON:0000020!1.33e-07!23;UBERON:0001444!1.42e-07!48;UBERON:0000161!1.64e-07!35;UBERON:0001032!2.71e-07!24;UBERON:0004456!2.71e-07!24;UBERON:0007196!2.99e-07!14;UBERON:0001558!2.99e-07!14;UBERON:0003126!6.98e-07!7;UBERON:0001005!6.98e-07!7;UBERON:0000065!8.36e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;2.19e-53;3!UBERON:0001033;2.19e-53;3!UBERON:0002372;3.30e-40;1!UBERON:0001961;3.30e-40;1!UBERON:0001744;3.30e-40;1!UBERON:0001042;3.30e-40;1!UBERON:0001735;3.30e-40;1!UBERON:0000341;3.11e-21;2!UBERON:0006562;6.96e-21;2!UBERON:0001043;1.83e-14;3!UBERON:0000165;1.59e-13;28!UBERON:0000974;5.54e-08;6!UBERON:0000020;6.29e-08;23!UBERON:0001032;1.23e-07;24!UBERON:0004456;1.23e-07;24!UBERON:0000153;1.91e-07;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,2.19e-53,3;UBERON:0001033,2.19e-53,3;UBERON:0010056,2.19e-53,3;UBERON:0002372,3.30e-40,1;UBERON:0001961,3.30e-40,1;UBERON:0001744,3.30e-40,1;UBERON:0001735,3.30e-40,1;UBERON:0001042,3.88e-36,10;UBERON:0009145,3.88e-36,10;UBERON:0006562,5.96e-33,11;UBERON:0000341,3.11e-21,2;UBERON:0001557,1.68e-19,19;UBERON:0000166,5.72e-17,22;UBERON:0001043,1.83e-14,3;UBERON:0009143,1.83e-14,3;UBERON:0000165,4.36e-13,29;UBERON:0000930,4.36e-13,29;UBERON:0000153,6.50e-11,62;UBERON:0007811,6.50e-11,62;UBERON:0000161,1.05e-10,36;UBERON:0008814,7.42e-10,18;UBERON:0000072,2.21e-08,47;UBERON:0001444,4.54e-08,49;UBERON:0001041,6.20e-08,87;UBERON:0000020,1.23e-07,24;UBERON:0001032,1.23e-07,24;UBERON:0004456,1.23e-07,24;UBERON:0000065,2.17e-07,54;UBERON:0000033,3.76e-07,56 | |||
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|short_description=p@chr12:53200600..53200613,- | |||
}} | }} |
Latest revision as of 09:40, 24 July 2015
Short description: | p@chr12:53200600..53200613, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53200600..53200613, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 2.19e-53 | 3 |
gustatory system | 2.19e-53 | 3 |
future tongue | 2.19e-53 | 3 |
tonsil | 3.30e-40 | 1 |
mucosa-associated lymphoid tissue | 3.30e-40 | 1 |
lymphoid tissue | 3.30e-40 | 1 |
tonsillar ring | 3.30e-40 | 1 |
chordate pharynx | 3.88e-36 | 10 |
pharyngeal region of foregut | 3.88e-36 | 10 |
pharynx | 5.96e-33 | 11 |
throat | 3.11e-21 | 2 |
upper respiratory tract | 1.68e-19 | 19 |
oral opening | 5.72e-17 | 22 |
esophagus | 1.83e-14 | 3 |
esophageal region | 1.83e-14 | 3 |
mouth | 4.36e-13 | 29 |
stomodeum | 4.36e-13 | 29 |
anterior region of body | 6.50e-11 | 62 |
craniocervical region | 6.50e-11 | 62 |
orifice | 1.05e-10 | 36 |
pharyngeal arch system | 7.42e-10 | 18 |
segment of respiratory tract | 2.21e-08 | 47 |
subdivision of head | 4.54e-08 | 49 |
foregut | 6.20e-08 | 87 |
sense organ | 1.23e-07 | 24 |
sensory system | 1.23e-07 | 24 |
entire sense organ system | 1.23e-07 | 24 |
respiratory tract | 2.17e-07 | 54 |
head | 3.76e-07 | 56 |