FFCP PHASE1:Hg19::chr12:53301119..53301125,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:53301119..53301125,-
|short_description=p14@KRT8
|description=CAGE_peak_14_at_KRT8_5end
|association_with_transcript=-275bp_to_ENST00000546542_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3856 | |EntrezGene=3856 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6446 | |HGNC=6446 | ||
|TSSclassifier=strong | |||
|UniProt=F8VQY3 | |UniProt=F8VQY3 | ||
|association_with_transcript=-275bp_to_ENST00000546542_5end | |||
|cluster_id=chr12:53301119..53301125,- | |||
|description=CAGE_peak_14_at_KRT8_5end | |||
|id=chr12:53301119..53301125,- | |||
|ontology_enrichment_celltype=CL:0000039!1.40e-16!7;CL:0000586!1.40e-16!7;CL:0000066!9.32e-12!254;CL:0000223!3.01e-08!59;CL:0000083!8.39e-08!4;CL:0002536!2.85e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0002541;5.15e-23;3!CL:0000039;4.76e-22;7!CL:0000586;4.76e-22;7!CL:0002253;8.32e-10;2!CL:0002231;9.11e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,4.61e-23,3;CL:0000039,5.69e-22,7;CL:0000586,5.69e-22,7;CL:0002253,7.98e-10,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.34e-21!106;DOID:0050687!9.71e-19!143;DOID:162!7.92e-13!235;DOID:14566!2.36e-12!239;DOID:299!1.86e-10!25;DOID:3095!3.13e-08!22;DOID:2994!3.13e-08!22;DOID:1793!8.39e-08!4;DOID:3493!5.00e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:1799;1.03e-17;1!DOID:10165;1.03e-17;1!DOID:1798;1.03e-17;1!DOID:9119;1.03e-17;1!DOID:3095;2.07e-12;22!DOID:2994;2.07e-12;22 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,6.23e-18,1;DOID:1799,8.72e-18,1;DOID:10165,8.72e-18,1;DOID:1798,8.72e-18,1;DOID:3095,2.30e-12,22;DOID:2994,2.30e-12,22 | |||
|ontology_enrichment_uberon=UBERON:0005631!8.00e-08!14;UBERON:0000158!8.00e-08!14;UBERON:0003124!8.20e-08!7;UBERON:0005409!7.32e-07!35;UBERON:0004921!9.73e-07!129;UBERON:0004185!9.73e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;5.15e-23;3!UBERON:0000920;5.15e-23;3!UBERON:0001052;1.28e-17;4!UBERON:0004907;2.66e-14;5!UBERON:0005631;1.42e-07;10!UBERON:0000158;1.42e-07;10!UBERON:0000059;5.39e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,4.61e-23,3;UBERON:0001052,1.03e-17,4;UBERON:0004907,2.25e-14,5;UBERON:0003124,1.85e-10,7;UBERON:0001046,1.84e-08,19;UBERON:0000059,5.00e-07,11 | |||
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| ||
|short_description=p14@KRT8 | |||
}} | }} |
Latest revision as of 01:08, 19 September 2015
Short description: | p14@KRT8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_KRT8_5end |
Coexpression cluster: | NA |
Association with transcript: | -275bp_to_ENST00000546542_5end |
EntrezGene: | KRT8 |
HGNC: | 6446 |
UniProt: | F8VQY3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 4.61e-23 | 3 |
germ line cell | 5.69e-22 | 7 |
germ cell | 5.69e-22 | 7 |
epithelial cell of large intestine | 7.98e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 4.61e-23 | 3 |
rectum | 1.03e-17 | 4 |
lower digestive tract | 2.25e-14 | 5 |
chorion | 1.85e-10 | 7 |
hindgut | 1.84e-08 | 19 |
large intestine | 5.00e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 6.23e-18 | 1 |
islet cell tumor | 8.72e-18 | 1 |
endocrine pancreas cancer | 8.72e-18 | 1 |
pancreatic endocrine carcinoma | 8.72e-18 | 1 |
germ cell and embryonal cancer | 2.30e-12 | 22 |
germ cell cancer | 2.30e-12 | 22 |