FFCP PHASE1:Hg19::chr12:53836453..53836474,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:53836453..53836474,+
|short_description=p9@PRR13
|description=CAGE_peak_9_at_PRR13_5end
|association_with_transcript=-17bp_to_BC071979_5end
|EntrezGene=5...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54458 | |EntrezGene=54458 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=24528 | |HGNC=24528 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-17bp_to_BC071979_5end | |||
|cluster_id=chr12:53836453..53836474,+ | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_9_at_PRR13_5end | |||
|id=chr12:53836453..53836474,+ | |||
|ontology_enrichment_celltype=CL:0000738!7.23e-09!140;CL:0000037!1.20e-08!172;CL:0000566!1.20e-08!172;CL:0002031!2.72e-08!124;CL:0002032!2.86e-08!165;CL:0000837!2.86e-08!165;CL:0002087!3.44e-08!119;CL:0000988!1.46e-07!182 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;3.71e-27;22!UBERON:0000160;1.63e-22;17!UBERON:0002108;6.99e-21;4!UBERON:0004921;1.79e-17;33!UBERON:0001155;4.80e-12;9!UBERON:0000922;4.35e-10;49!UBERON:0000059;4.94e-10;11!UBERON:0001555;2.15e-08;54 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,3.63e-24,25;UBERON:0000160,1.30e-22,17;UBERON:0002108,6.01e-21,4;UBERON:0001155,4.18e-12,9;UBERON:0000059,4.42e-10,11;UBERON:0004921,1.31e-07,118 | |||
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| ||
|short_description=p9@PRR13 | |||
}} | }} |
Latest revision as of 03:10, 19 September 2015
Short description: | p9@PRR13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_PRR13_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | -17bp_to_BC071979_5end |
EntrezGene: | PRR13 |
HGNC: | 24528 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 3.63e-24 | 25 |
intestine | 1.30e-22 | 17 |
small intestine | 6.01e-21 | 4 |
colon | 4.18e-12 | 9 |
large intestine | 4.42e-10 | 11 |
subdivision of digestive tract | 1.31e-07 | 118 |