FFCP PHASE1:Hg19::chr1:1874546..1874553,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:1874546..1874553,+ | |||
|description=CAGE_peak_at_chr1:1874546..1874553,+ | |description=CAGE_peak_at_chr1:1874546..1874553,+ | ||
|id=chr1:1874546..1874553,+ | |id=chr1:1874546..1874553,+ | ||
|ontology_enrichment_celltype=CL:0000312!6.83e-23!5;CL:0000240!3.41e-19!6;CL:0000311!3.41e-19!6;CL:0000079!3.41e-19!6;CL:0000237!3.41e-19!6;CL:0000036!3.41e-19!6;CL:0000357!3.41e-19!6;CL:0000114!3.41e-19!6;CL:0000035!1.78e-15!20;CL:0000362!1.47e-14!8;CL:0000181!5.07e-10!12;CL:0000417!5.07e-10!12;CL:0000668!5.07e-10!12;CL:0000414!5.07e-10!12;CL:0000412!5.07e-10!12;CL:0000182!5.07e-10!12;CL:0002159!3.50e-09!13;CL:0000242!1.87e-07!2 | |ontology_enrichment_celltype=CL:0000312!6.83e-23!5;CL:0000240!3.41e-19!6;CL:0000311!3.41e-19!6;CL:0000079!3.41e-19!6;CL:0000237!3.41e-19!6;CL:0000036!3.41e-19!6;CL:0000357!3.41e-19!6;CL:0000114!3.41e-19!6;CL:0000035!1.78e-15!20;CL:0000362!1.47e-14!8;CL:0000181!5.07e-10!12;CL:0000417!5.07e-10!12;CL:0000668!5.07e-10!12;CL:0000414!5.07e-10!12;CL:0000412!5.07e-10!12;CL:0000182!5.07e-10!12;CL:0002159!3.50e-09!13;CL:0000242!1.87e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000312;4.66e-21;5!CL:0000240;8.34e-18;6!CL:0000311;8.34e-18;6!CL:0000079;8.34e-18;6!CL:0000237;8.34e-18;6!CL:0000362;2.31e-12;9!CL:0002159;1.93e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000312,5.15e-21,5;CL:0000240,9.07e-18,6;CL:0000311,9.07e-18,6;CL:0000079,9.07e-18,6;CL:0000237,9.07e-18,6;CL:0000036,9.07e-18,6;CL:0000357,9.07e-18,6;CL:0000114,9.07e-18,6;CL:0000362,2.45e-12,9;CL:0002159,2.00e-08,14;CL:0000076,1.52e-07,63 | |||
|ontology_enrichment_development_v019=CL:0000357;8.34e-18;6!CL:0000114;8.34e-18;6 | |||
|ontology_enrichment_disease=DOID:0050619!6.65e-14!1;DOID:1357!6.65e-14!1;DOID:4929!1.75e-07!2 | |ontology_enrichment_disease=DOID:0050619!6.65e-14!1;DOID:1357!6.65e-14!1;DOID:4929!1.75e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:1749;1.93e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.86e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0001764!6.65e-14!1;UBERON:0001825!6.65e-14!1;UBERON:0004913!1.10e-13!1;UBERON:0003703!1.10e-13!1;UBERON:0001174!1.10e-13!1;UBERON:0004914!1.10e-13!1;UBERON:0008835!2.34e-09!22;UBERON:0003894!2.34e-09!22;UBERON:0009854!5.85e-09!23;UBERON:0001003!1.45e-08!14;UBERON:0007376!1.45e-08!14;UBERON:0007383!1.45e-08!14;UBERON:0007499!2.94e-08!25;UBERON:0009497!2.94e-08!25;UBERON:0000015!2.94e-08!25;UBERON:0002423!2.94e-08!25;UBERON:0006235!2.94e-08!25;UBERON:0004161!2.94e-08!25;UBERON:0009856!6.00e-08!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0003343;6.30e-26;4!UBERON:0004785;6.30e-26;4!UBERON:0000974;8.34e-18;6!UBERON:0003729;5.49e-09;13!UBERON:0001003;5.74e-08;15!UBERON:0007376;5.74e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003343,5.56e-26,4;UBERON:0004785,5.56e-26,4;UBERON:0000974,2.73e-11,10;UBERON:0003729,5.28e-09,13;UBERON:0001003,5.93e-08,15;UBERON:0007376,5.93e-08,15;UBERON:0007383,5.93e-08,15 | |||
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|short_description=p@chr1:1874546..1874553,+ | |short_description=p@chr1:1874546..1874553,+ | ||
}} | }} |
Latest revision as of 01:34, 28 July 2015
Short description: | p@chr1:1874546..1874553, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:1874546..1874553, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
keratinocyte | 5.15e-21 | 5 |
stratified squamous epithelial cell | 9.07e-18 | 6 |
keratin accumulating cell | 9.07e-18 | 6 |
stratified epithelial cell | 9.07e-18 | 6 |
keratinizing barrier epithelial cell | 9.07e-18 | 6 |
epithelial fate stem cell | 9.07e-18 | 6 |
stratified epithelial stem cell | 9.07e-18 | 6 |
surface ectodermal cell | 9.07e-18 | 6 |
epidermal cell | 2.45e-12 | 9 |
general ecto-epithelial cell | 2.00e-08 | 14 |
squamous epithelial cell | 1.52e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
mucosa of oral region | 5.56e-26 | 4 |
respiratory system mucosa | 5.56e-26 | 4 |
neck | 2.73e-11 | 10 |
mouth mucosa | 5.28e-09 | 13 |
skin epidermis | 5.93e-08 | 15 |
outer epithelium | 5.93e-08 | 15 |
enveloping layer of ectoderm | 5.93e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.86e-08 | 14 |