FFCP PHASE1:Hg19::chr4:81129031..81129056,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:81129031..81129056,+ | |||
|description=CAGE_peak_at_chr4:81129031..81129056,+ | |description=CAGE_peak_at_chr4:81129031..81129056,+ | ||
|id=chr4:81129031..81129056,+ | |id=chr4:81129031..81129056,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002127;2.06e-15;1!CL:0000911;2.06e-15;1!CL:0000814;2.06e-15;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002127,3.17e-15,1;CL:0000914,3.17e-15,1;CL:0000911,3.17e-15,1;CL:0000814,3.17e-15,1;CL:0002042,3.17e-15,1;CL:0002039,3.17e-15,1;CL:0002040,3.17e-15,1;CL:0002041,3.17e-15,1;CL:0000893,2.87e-08,2;CL:0002489,2.87e-08,2;CL:0000809,2.87e-08,2;CL:0000808,2.87e-08,2;CL:0000894,2.87e-08,2;CL:0000806,2.87e-08,2;CL:0000807,2.87e-08,2;CL:0000805,2.87e-08,2;CL:0002425,2.87e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002425;2.31e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;2.06e-15;1!DOID:154;1.20e-08;2!DOID:4236;1.20e-08;2!DOID:4074;2.31e-08;2!DOID:4905;2.31e-08;2!DOID:3350;2.31e-08;2!DOID:3498;2.31e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,1.34e-15,1;DOID:154,1.20e-08,2;DOID:4236,1.20e-08,2;DOID:3350,1.86e-08,2;DOID:4074,2.48e-08,2;DOID:4905,2.48e-08,2;DOID:3498,2.48e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000073!1.66e-09!94;UBERON:0001016!1.66e-09!94;UBERON:0002619!1.19e-08!22;UBERON:0001893!3.93e-08!34;UBERON:0002020!5.74e-08!34;UBERON:0003528!5.74e-08!34;UBERON:0001869!5.98e-08!32;UBERON:0000200!1.94e-07!6;UBERON:0002791!1.97e-07!33;UBERON:0000956!3.22e-07!25;UBERON:0000203!3.22e-07!25;UBERON:0001017!7.64e-07!82;UBERON:0001950!8.02e-07!20;UBERON:0005743!9.10e-07!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.436194716338694,0,0.242584061187816,0.232429036905685,0,0,0.575384784644301,0,0,0.344745680736619,1.29096936716765,0,0.752969358170419,0,0,0,0,0.639337125799041,0,0.199463657621632,0,3.19230162491442,0,0,0.251248665256743,0.521482918420201,0.434377689410233,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0.263384084775077,0.393419540227666,0.786021525498329,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0.128091319725675,0.260118695119756,0.328875809207352,0,0.289803085735052,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.717558542755448,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0.161646056818812,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,0.197030760201927,0.431255149719035,0,0.254094624222463,0,0,0.335032530668698,1.91381625495949,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0.165284915360978,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.426851060090485,0,0,0,0.423347165447766,0,3.08876895924805,0,0,0,0.50787533340481,0.1605880751037,0,1.27753871307098,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0.140669416410513,0.556543525114529,0.16480387422676,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0.254253650292766,0,0,0,8.68124974666461,0.885741385813839,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,1.21390189767046,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,1.71986032471617,0,0,0,0,0,0.225980740780532,0,0.19871461170299,0.379864775735272,0,0.240476460754601,0,0,0.144090417154106,0,0.343189995723929,1.00838358591705,2.85780831800495,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.1251909307065,0,0,0,0.830091809617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0.464033759878494,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.553033744606923,0,0.132864840313363,0,0,0.245772908753719,0,0.19998739585493,0.533458648470704,0.516644938982447,0,0.368211900503681,0,0,3.32525365389494,0.107824811396682,0.471797825567689,0.873677105536111,0,0.637724760305049,0,0,0,0,0,0.352675943690684,0,0.256916900385838,0,0.159633859057151,0,0,0.0691572524642179,0.322951291263702,0,0,0,0.183428598521679,0.231051332300676,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0.556157009460346,0,0,0,0,0.215927591218621,0,0.214429632529969,0.158013611732727,0,0.173858272302579,0.801711364730253,0,0,0,0,0.591660003652827,0.937347452350735,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,1.31928620094515,0,0,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0.473314686579554,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.535928260312357,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.0814032686109745,0.533636729388577,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0.436194716338694,0,0.242584061187816,0.232429036905685,0,0,0.575384784644301,0,0,0.344745680736619,1.29096936716765,0,0.752969358170419,0,0,0,0,0.639337125799041,0,0.199463657621632,0,3.19230162491442,0,0,0.251248665256743,0.521482918420201,0.434377689410233,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0.426730222566507,0,0,0,0,0.569212969109448,0.587237189370939,0,0,0,0.263384084775077,0.393419540227666,0.786021525498329,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0.270803863765016,0.128091319725675,0.260118695119756,0.328875809207352,0,0.289803085735052,0,0,0,0.226618685395132,0,0,0,0,0,0,0,0,0,0,0,0.403213486449465,0,0.434473211648397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0,0,0,0,0.717558542755448,0,0,0,0,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0.161646056818812,0,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00876629594175,0.197030760201927,0.431255149719035,0,0.254094624222463,0,0,0.335032530668698,1.91381625495949,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0.206768026122887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0.145016693914229,0,0,0.165284915360978,0,0.127612712494584,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0.426851060090485,0,0,0,0.423347165447766,0,3.08876895924805,0,0,0,0.50787533340481,0.1605880751037,0,1.27753871307098,0,0,0,0,0,0,0,0.270455678475983,0,0,0,0,0,0.780103689942349,0,0,0,0,0,0.140669416410513,0.556543525114529,0.16480387422676,0,0,0,0,0,0,0,0.179736702294654,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0.254253650292766,0,0,0,8.68124974666461,0.885741385813839,0,0,0.110579259931225,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0.317873157960757,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,1.21390189767046,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,1.71986032471617,0,0,0,0,0,0.225980740780532,0,0.19871461170299,0.379864775735272,0,0.240476460754601,0,0,0.144090417154106,0,0.343189995723929,1.00838358591705,2.85780831800495,0,0.135904206073614,0.104602846312333,0,0,0,0,0,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.408610218334727,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.246277562248017,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0.244052529803926,0.1251909307065,0,0,0,0.830091809617385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0.464033759878494,0,0.400027764663154,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.553033744606923,0,0.132864840313363,0,0,0.245772908753719,0,0.19998739585493,0.533458648470704,0.516644938982447,0,0.368211900503681,0,0,3.32525365389494,0.107824811396682,0.471797825567689,0.873677105536111,0,0.637724760305049,0,0,0,0,0,0.352675943690684,0,0.256916900385838,0,0.159633859057151,0,0,0.0691572524642179,0.322951291263702,0,0,0,0.183428598521679,0.231051332300676,0,0,0,0,0,0,0,0,0,0.270150338473579,0,0.206686796501184,0.253663240775627,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.0657727735628491,0,0.556157009460346,0,0,0,0,0.215927591218621,0,0.214429632529969,0.158013611732727,0,0.173858272302579,0.801711364730253,0,0,0,0,0.591660003652827,0.937347452350735,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,1.31928620094515,0,0,0,0,0,0,0.196308467114945,0,0,0.169927114687817,0,0,0,0,0,0,0,0,0,0.473314686579554,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.535928260312357,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0.0814032686109745,0.533636729388577,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:81129031..81129056,+ | |short_description=p@chr4:81129031..81129056,+ | ||
}} | }} |
Latest revision as of 07:17, 30 July 2015
Short description: | p@chr4:81129031..81129056, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:81129031..81129056, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
innate effector T cell | 3.17e-15 | 1 |
immature NK T cell | 3.17e-15 | 1 |
effector T cell | 3.17e-15 | 1 |
mature NK T cell | 3.17e-15 | 1 |
immature NK T cell stage IV | 3.17e-15 | 1 |
immature NK T cell stage I | 3.17e-15 | 1 |
immature NK T cell stage II | 3.17e-15 | 1 |
immature NK T cell stage III | 3.17e-15 | 1 |
thymocyte | 2.87e-08 | 2 |
double negative thymocyte | 2.87e-08 | 2 |
double-positive, alpha-beta thymocyte | 2.87e-08 | 2 |
DN4 thymocyte | 2.87e-08 | 2 |
DN1 thymic pro-T cell | 2.87e-08 | 2 |
DN2 thymocyte | 2.87e-08 | 2 |
DN3 thymocyte | 2.87e-08 | 2 |
immature single positive thymocyte | 2.87e-08 | 2 |
early T lineage precursor | 2.87e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 1.34e-15 | 1 |
mixed cell type cancer | 1.20e-08 | 2 |
carcinosarcoma | 1.20e-08 | 2 |
mesenchymal cell neoplasm | 1.86e-08 | 2 |
pancreas adenocarcinoma | 2.48e-08 | 2 |
pancreatic carcinoma | 2.48e-08 | 2 |
pancreatic ductal adenocarcinoma | 2.48e-08 | 2 |