FFCP PHASE1:Hg19::chr12:6484376..6484402,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:6484376..6484402,-
|short_description=p8@SCNN1A
|description=CAGE_peak_8_at_SCNN1A_5end
|association_with_transcript=0bp_to_ENST00000358945,ENST0000036016...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6337 | |EntrezGene=6337 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10599 | |HGNC=10599 | ||
|TSSclassifier=strong | |||
|UniProt=E7EVF3,P37088 | |UniProt=E7EVF3,P37088 | ||
|association_with_transcript=0bp_to_ENST00000358945,ENST00000360168,ENST00000542436,ENST00000543585,NM_001159576,uc001qnw.2_5end | |||
|cluster_id=chr12:6484376..6484402,- | |||
|description=CAGE_peak_8_at_SCNN1A_5end | |||
|id=chr12:6484376..6484402,- | |||
|ontology_enrichment_celltype=CL:0000066!4.53e-10!254;CL:0000223!9.10e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000123;6.84e-10;2!CL:0000242;6.84e-10;2!CL:0002195;1.57e-09;2!CL:0002571;1.57e-09;2!CL:0002536;6.11e-09;2!CL:0002602;1.18e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,6.85e-10,2;CL:0002195,1.41e-09,2;CL:0002571,1.41e-09,2;CL:0002536,3.83e-09,2;CL:0002602,8.61e-09,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!3.99e-11!106;DOID:0050687!4.69e-09!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000466!6.44e-15!126;UBERON:0005177!8.15e-13!107;UBERON:0004921!6.15e-12!129;UBERON:0004185!6.15e-12!129;UBERON:0001048!7.84e-12!168;UBERON:0000464!1.24e-11!104;UBERON:0000077!1.13e-10!130;UBERON:0000481!1.18e-10!347;UBERON:0001041!4.22e-10!98;UBERON:0004119!4.64e-10!169;UBERON:0000925!4.64e-10!169;UBERON:0006595!4.64e-10!169;UBERON:0001007!9.50e-10!155;UBERON:0001555!9.50e-10!155;UBERON:0007026!9.50e-10!155;UBERON:0005911!6.78e-09!82;UBERON:0003104!1.99e-08!238;UBERON:0009142!1.99e-08!238;UBERON:0000922!2.03e-08!612;UBERON:0000062!1.00e-07!511;UBERON:0003101!1.16e-07!22;UBERON:0000079!1.16e-07!22;UBERON:0003135!1.85e-07!11;UBERON:0005153!1.99e-07!37;UBERON:0002530!2.83e-07!59;UBERON:0005178!3.57e-07!34;UBERON:0002224!3.57e-07!34;UBERON:0000063!3.80e-07!97;UBERON:0002050!4.42e-07!605;UBERON:0005423!4.42e-07!605;UBERON:0005181!7.97e-07!35;UBERON:0000923!9.57e-07!604;UBERON:0005291!9.57e-07!604;UBERON:0006598!9.57e-07!604;UBERON:0002532!9.57e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0000007;6.11e-09;2!UBERON:0003127;1.18e-08;2!UBERON:0006444;1.18e-08;2!UBERON:0001995;1.18e-08;2!UBERON:0004715;1.18e-08;2!UBERON:0011135;8.38e-08;5!UBERON:0002216;8.38e-08;5!UBERON:0011134;8.38e-08;5!UBERON:0002209;8.38e-08;5!UBERON:0002213;8.38e-08;5!UBERON:0007844;8.38e-08;5!UBERON:0011138;8.38e-08;5!UBERON:0001130;8.38e-08;5!UBERON:0001066;8.38e-08;5!UBERON:0001468;8.38e-08;5!UBERON:0006947;5.87e-07;3!UBERON:0004054;5.87e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005177,6.06e-10,101;UBERON:0000007,5.10e-09,2;UBERON:0000949,8.57e-09,45;UBERON:0006444,8.61e-09,2;UBERON:0001995,8.61e-09,2;UBERON:0004715,8.61e-09,2;UBERON:0003127,1.05e-08,2;UBERON:0011135,6.70e-08,5;UBERON:0002216,6.70e-08,5;UBERON:0011134,6.70e-08,5;UBERON:0002209,6.70e-08,5;UBERON:0002213,6.70e-08,5;UBERON:0005856,6.70e-08,5;UBERON:0005866,6.70e-08,5;UBERON:0005863,6.70e-08,5;UBERON:0007844,6.70e-08,5;UBERON:0011138,6.70e-08,5;UBERON:0001130,6.70e-08,5;UBERON:0001066,6.70e-08,5;UBERON:0001468,6.70e-08,5;UBERON:0006947,5.88e-07,3;UBERON:0004054,5.88e-07,3 | |||
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| ||
|short_description=p8@SCNN1A | |||
}} | }} |
Latest revision as of 20:42, 19 September 2015
Short description: | p8@SCNN1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_SCNN1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000358945, ENST00000360168, ENST00000542436, ENST00000543585, NM_001159576, uc001qnw.2_5end |
EntrezGene: | SCNN1A |
HGNC: | 10599 |
UniProt: | E7EVF3P37088 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 6.85e-10 | 2 |
hepatic stem cell | 1.41e-09 | 2 |
hepatic mesenchymal stem cell | 1.41e-09 | 2 |
amniotic epithelial cell | 3.83e-09 | 2 |
annulus pulposus cell | 8.61e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
trunk region element | 6.06e-10 | 101 |
pituitary gland | 5.10e-09 | 2 |
endocrine system | 8.57e-09 | 45 |
annulus fibrosus | 8.61e-09 | 2 |
fibrocartilage | 8.61e-09 | 2 |
annulus fibrosus disci intervertebralis | 8.61e-09 | 2 |
open tracheal system trachea | 1.05e-08 | 2 |
intervertebral cartilage | 6.70e-08 | 5 |
symphysis | 6.70e-08 | 5 |
nonsynovial joint | 6.70e-08 | 5 |
fibrous joint | 6.70e-08 | 5 |
cartilaginous joint | 6.70e-08 | 5 |
developing mesenchymal condensation | 6.70e-08 | 5 |
pre-cartilage condensation | 6.70e-08 | 5 |
cartilaginous condensation | 6.70e-08 | 5 |
cartilage element | 6.70e-08 | 5 |
post-cranial axial skeletal system | 6.70e-08 | 5 |
vertebral column | 6.70e-08 | 5 |
intervertebral disk | 6.70e-08 | 5 |
intervertebral joint | 6.70e-08 | 5 |
male genital duct | 5.88e-07 | 3 |
internal male genitalia | 5.88e-07 | 3 |