FFCP PHASE1:Hg19::chr5:126113110..126113127,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4001 | |EntrezGene=4001 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6637 | |HGNC=6637 | ||
|TSSclassifier=strong | |||
|UniProt=E9PBF6 | |UniProt=E9PBF6 | ||
|association_with_transcript=229bp_to_ENST00000395354_5end | |association_with_transcript=229bp_to_ENST00000395354_5end | ||
|cluster_id=chr5:126113110..126113127,+ | |||
|description=CAGE_peak_9_at_LMNB1_5end | |description=CAGE_peak_9_at_LMNB1_5end | ||
|id=chr5:126113110..126113127,+ | |id=chr5:126113110..126113127,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000540;1.35e-22;6!CL:0000404;1.35e-22;6!CL:0000039;2.07e-19;7!CL:0000586;2.07e-19;7!CL:0002322;1.73e-15;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.97e-23,6;CL:0000031,7.97e-23,6;CL:0000404,7.97e-23,6;CL:0000039,2.35e-19,7;CL:0000586,2.35e-19,7;CL:0000047,3.47e-17,8;CL:0002322,1.82e-15,5 | |||
|ontology_enrichment_development_v019=CL:0000031;1.35e-22;6!UBERON:0009117;5.24e-08;10!UBERON:0005564;5.24e-08;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;2.22e-09;22!DOID:2994;2.22e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.20e-09,22;DOID:2994,2.20e-09,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.91e-10;8!UBERON:0003135;2.54e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,7.60e-10,8;UBERON:0003135,2.72e-07,11 | |||
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| ||
|short_description=p9@LMNB1 | |short_description=p9@LMNB1 | ||
}} | }} |
Latest revision as of 01:42, 20 September 2015
Short description: | p9@LMNB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LMNB1_5end |
Coexpression cluster: | NA |
Association with transcript: | 229bp_to_ENST00000395354_5end |
EntrezGene: | LMNB1 |
HGNC: | 6637 |
UniProt: | E9PBF6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.97e-23 | 6 |
neuroblast | 7.97e-23 | 6 |
electrically signaling cell | 7.97e-23 | 6 |
germ line cell | 2.35e-19 | 7 |
germ cell | 2.35e-19 | 7 |
neuronal stem cell | 3.47e-17 | 8 |
embryonic stem cell | 1.82e-15 | 5 |
Ontology term | p-value | n |
---|---|---|
testis | 7.60e-10 | 8 |
male reproductive organ | 2.72e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.20e-09 | 22 |
germ cell cancer | 2.20e-09 | 22 |