FFCP PHASE1:Hg19::chr5:156496412..156496429,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:156496412..156496429,- | |||
|coexpression_cluster_id=C190 | |||
|description=CAGE_peak_at_chr5:156496412..156496429,- | |description=CAGE_peak_at_chr5:156496412..156496429,- | ||
|id=chr5:156496412..156496429,- | |id=chr5:156496412..156496429,- | ||
|ontology_enrichment_celltype=CL:0000039!1.51e-27!7;CL:0000586!1.51e-27!7;CL:0002322!4.18e-14!5;CL:0002563!7.01e-09!4;CL:0000148!2.62e-07!10;CL:0000541!2.62e-07!10 | |ontology_enrichment_celltype=CL:0000039!1.51e-27!7;CL:0000586!1.51e-27!7;CL:0002322!4.18e-14!5;CL:0002563!7.01e-09!4;CL:0000148!2.62e-07!10;CL:0000541!2.62e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.28e-20;4!CL:0000039;2.00e-12;7!CL:0000586;2.00e-12;7!CL:0002253;3.70e-11;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.28e-20,4;CL:0000039,2.00e-12,7;CL:0000586,2.00e-12,7;CL:0002253,3.70e-11,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1799!2.04e-09!1;DOID:10165!2.04e-09!1;DOID:1798!2.04e-09!1;DOID:3095!1.14e-08!22;DOID:2994!1.14e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:1799;2.82e-21;1!DOID:10165;2.82e-21;1!DOID:1798;2.82e-21;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.82e-21,1;DOID:10165,2.82e-21,1;DOID:1798,2.82e-21,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!5.19e-10!35;UBERON:0000160!9.16e-10!27;UBERON:0001052!5.99e-09!4;UBERON:0001242!7.01e-09!4;UBERON:0001262!7.01e-09!4;UBERON:0004786!7.01e-09!4;UBERON:0004808!7.01e-09!4;UBERON:0001277!7.01e-09!4;UBERON:0004907!2.54e-07!5;UBERON:0003350!2.88e-07!5;UBERON:0000059!4.06e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0001052;8.55e-21;4!UBERON:0001242;1.28e-20;4!UBERON:0001262;1.28e-20;4!UBERON:0004786;1.28e-20;4!UBERON:0004808;1.28e-20;4!UBERON:0001277;1.28e-20;4!UBERON:0000160;4.65e-18;17!UBERON:0000059;5.40e-17;11!UBERON:0004907;7.51e-17;5!UBERON:0005409;3.15e-14;22!UBERON:0000485;3.15e-12;7!UBERON:0003929;3.15e-12;7!UBERON:0003350;8.06e-11;8!UBERON:0004921;1.47e-10;33!UBERON:0001155;7.74e-10;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001052,8.55e-21,4;UBERON:0001242,1.28e-20,4;UBERON:0001262,1.28e-20,4;UBERON:0004786,1.28e-20,4;UBERON:0004808,1.28e-20,4;UBERON:0001277,1.28e-20,4;UBERON:0000160,4.65e-18,17;UBERON:0000059,5.40e-17,11;UBERON:0004907,7.51e-17,5;UBERON:0005409,1.24e-12,25;UBERON:0003350,8.06e-11,8;UBERON:0001155,7.74e-10,9;UBERON:0000485,1.01e-09,9 | |||
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|short_description=p@chr5:156496412..156496429,- | |short_description=p@chr5:156496412..156496429,- | ||
}} | }} |
Latest revision as of 12:14, 30 July 2015
Short description: | p@chr5:156496412..156496429, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:156496412..156496429, - |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.28e-20 | 4 |
germ line cell | 2.00e-12 | 7 |
germ cell | 2.00e-12 | 7 |
epithelial cell of large intestine | 3.70e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
rectum | 8.55e-21 | 4 |
intestinal mucosa | 1.28e-20 | 4 |
wall of intestine | 1.28e-20 | 4 |
gastrointestinal system mucosa | 1.28e-20 | 4 |
gastrointestinal system epithelium | 1.28e-20 | 4 |
intestinal epithelium | 1.28e-20 | 4 |
intestine | 4.65e-18 | 17 |
large intestine | 5.40e-17 | 11 |
lower digestive tract | 7.51e-17 | 5 |
gastrointestinal system | 1.24e-12 | 25 |
epithelium of mucosa | 8.06e-11 | 8 |
colon | 7.74e-10 | 9 |
simple columnar epithelium | 1.01e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.82e-21 | 1 |
endocrine pancreas cancer | 2.82e-21 | 1 |
pancreatic endocrine carcinoma | 2.82e-21 | 1 |