FFCP PHASE1:Hg19::chr1:27271865..27271878,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10726 | |EntrezGene=10726 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8045 | |HGNC=8045 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=239bp_to_ENST00000484772_5end | |association_with_transcript=239bp_to_ENST00000484772_5end | ||
|cluster_id=chr1:27271865..27271878,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_7_at_NUDC_5end | |description=CAGE_peak_7_at_NUDC_5end | ||
|id=chr1:27271865..27271878,+ | |id=chr1:27271865..27271878,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000182;1.64e-10;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.68e-10,12 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.37e-15;2!UBERON:0004161;3.30e-11;11!UBERON:0009497;1.24e-09;13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!3.72e-15!3;UBERON:0004054!3.72e-15!3;UBERON:0001301!4.06e-12!1;UBERON:0000998!6.97e-12!1;UBERON:0006868!6.97e-12!1;UBERON:0005904!1.33e-11!4;UBERON:0002107!2.66e-09!19;UBERON:0006925!2.66e-09!19;UBERON:0008836!2.66e-09!19;UBERON:0005172!8.24e-09!55;UBERON:0005173!8.24e-09!55;UBERON:0008835!4.70e-08!22;UBERON:0003894!4.70e-08!22;UBERON:0002417!7.11e-08!61;UBERON:0000916!7.11e-08!61;UBERON:0009854!1.04e-07!23;UBERON:0005409!3.63e-07!35;UBERON:0007499!4.19e-07!25;UBERON:0009497!4.19e-07!25;UBERON:0000015!4.19e-07!25;UBERON:0002423!4.19e-07!25;UBERON:0006235!4.19e-07!25;UBERON:0004161!4.19e-07!25;UBERON:0005057!7.78e-07!26;UBERON:0009856!7.78e-07!26 | |ontology_enrichment_uberon=UBERON:0006947!3.72e-15!3;UBERON:0004054!3.72e-15!3;UBERON:0001301!4.06e-12!1;UBERON:0000998!6.97e-12!1;UBERON:0006868!6.97e-12!1;UBERON:0005904!1.33e-11!4;UBERON:0002107!2.66e-09!19;UBERON:0006925!2.66e-09!19;UBERON:0008836!2.66e-09!19;UBERON:0005172!8.24e-09!55;UBERON:0005173!8.24e-09!55;UBERON:0008835!4.70e-08!22;UBERON:0003894!4.70e-08!22;UBERON:0002417!7.11e-08!61;UBERON:0000916!7.11e-08!61;UBERON:0009854!1.04e-07!23;UBERON:0005409!3.63e-07!35;UBERON:0007499!4.19e-07!25;UBERON:0009497!4.19e-07!25;UBERON:0000015!4.19e-07!25;UBERON:0002423!4.19e-07!25;UBERON:0006235!4.19e-07!25;UBERON:0004161!4.19e-07!25;UBERON:0005057!7.78e-07!26;UBERON:0009856!7.78e-07!26 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;3.16e-29;1!UBERON:0002107;3.03e-24;19!UBERON:0006925;3.03e-24;19!UBERON:0002423;1.40e-18;25!UBERON:0002365;6.02e-15;31!UBERON:0002330;6.02e-15;31!UBERON:0002368;1.37e-12;33!UBERON:0006947;1.09e-10;3!UBERON:0004054;1.09e-10;3!UBERON:0000949;3.91e-09;43!UBERON:0005904;2.43e-08;4!UBERON:0005172;3.89e-07;52!UBERON:0005173;3.89e-07;52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,2.37e-29,1;UBERON:0002107,3.31e-24,19;UBERON:0006925,3.31e-24,19;UBERON:0008836,3.31e-24,19;UBERON:0008835,5.39e-21,22;UBERON:0003894,5.39e-21,22;UBERON:0009854,4.14e-20,23;UBERON:0007499,1.50e-18,25;UBERON:0009497,1.50e-18,25;UBERON:0000015,1.50e-18,25;UBERON:0002423,1.50e-18,25;UBERON:0006235,1.50e-18,25;UBERON:0004161,1.50e-18,25;UBERON:0009856,7.34e-18,26;UBERON:0002365,4.49e-15,31;UBERON:0002330,4.49e-15,31;UBERON:0002368,2.05e-13,35;UBERON:0005172,2.07e-13,54;UBERON:0005173,2.07e-13,54;UBERON:0002417,4.17e-12,60;UBERON:0000916,4.17e-12,60;UBERON:0006947,9.90e-11,3;UBERON:0004054,9.90e-11,3;UBERON:0000949,1.52e-10,45;UBERON:0003929,7.27e-09,54;UBERON:0005904,2.26e-08,4;UBERON:0002530,3.77e-08,59;UBERON:0005177,2.64e-07,101 | |||
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|short_description=p7@NUDC | |short_description=p7@NUDC | ||
}} | }} |
Latest revision as of 06:58, 17 September 2015
Short description: | p7@NUDC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_NUDC_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 239bp_to_ENST00000484772_5end |
EntrezGene: | NUDC |
HGNC: | 8045 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.68e-10 | 12 |
Ontology term | p-value | n |
---|---|---|
epididymis | 2.37e-29 | 1 |
liver | 3.31e-24 | 19 |
digestive gland | 3.31e-24 | 19 |
liver bud | 3.31e-24 | 19 |
hepatic diverticulum | 5.39e-21 | 22 |
liver primordium | 5.39e-21 | 22 |
digestive tract diverticulum | 4.14e-20 | 23 |
epithelial sac | 1.50e-18 | 25 |
epithelium of foregut-midgut junction | 1.50e-18 | 25 |
anatomical boundary | 1.50e-18 | 25 |
hepatobiliary system | 1.50e-18 | 25 |
foregut-midgut junction | 1.50e-18 | 25 |
septum transversum | 1.50e-18 | 25 |
sac | 7.34e-18 | 26 |
exocrine gland | 4.49e-15 | 31 |
exocrine system | 4.49e-15 | 31 |
endocrine gland | 2.05e-13 | 35 |
abdomen element | 2.07e-13 | 54 |
abdominal segment element | 2.07e-13 | 54 |
abdominal segment of trunk | 4.17e-12 | 60 |
abdomen | 4.17e-12 | 60 |
male genital duct | 9.90e-11 | 3 |
internal male genitalia | 9.90e-11 | 3 |
endocrine system | 1.52e-10 | 45 |
gut epithelium | 7.27e-09 | 54 |
duct of male reproductive system | 2.26e-08 | 4 |
gland | 3.77e-08 | 59 |
trunk region element | 2.64e-07 | 101 |