FFCP PHASE1:Hg19::chr12:77260073..77260082,-: Difference between revisions
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|id=chr12:77260073..77260082,-
|short_description=p4@CSRP2
|description=CAGE_peak_4_at_CSRP2_5end
|association_with_transcript=-33bp_to_AB528310,BT019913,DQ890975,D...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1466 | |EntrezGene=1466 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=2470 | |HGNC=2470 | ||
|TSSclassifier=strong | |||
|UniProt=Q16527 | |UniProt=Q16527 | ||
|association_with_transcript=-33bp_to_AB528310,BT019913,DQ890975,DQ894149,U46006_5end | |||
|cluster_id=chr12:77260073..77260082,- | |||
|coexpression_cluster_id=C163 | |||
|description=CAGE_peak_4_at_CSRP2_5end | |||
|id=chr12:77260073..77260082,- | |||
|ontology_enrichment_celltype=CL:0000188!5.84e-15!9;CL:0000594!3.68e-08!3;CL:0002605!4.25e-08!3;CL:0000064!1.17e-07!3;CL:0005012!1.17e-07!3;CL:0000067!1.17e-07!3;CL:0002304!1.17e-07!3;CL:0000128!1.49e-07!7;CL:0000126!1.49e-07!7;CL:0000127!1.49e-07!7;CL:0002453!1.49e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0000817;1.21e-40;1!CL:0002615;1.96e-14;3!CL:0000346;1.96e-14;3!CL:1000428;1.96e-14;3!CL:0002559;3.35e-09;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000817,1.60e-14,3;CL:0000346,1.83e-14,3;CL:1000428,1.83e-14,3;CL:0002615,2.09e-14,3;CL:0002559,3.22e-09,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050619!8.49e-07!1;DOID:1357!8.49e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:5409;2.94e-11;4!DOID:1325;5.54e-07;7!DOID:3904;5.54e-07;7 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,2.80e-11,4;DOID:1325,5.38e-07,7;DOID:3904,5.38e-07,7 | |||
|ontology_enrichment_uberon=UBERON:0001873!4.94e-12!2;UBERON:0010122!4.94e-12!2;UBERON:0002616!1.50e-08!59;UBERON:0000955!2.24e-08!69;UBERON:0006238!2.24e-08!69;UBERON:0005383!2.67e-08!3;UBERON:0005382!2.67e-08!3;UBERON:0003056!3.42e-08!61;UBERON:0001017!4.91e-08!82;UBERON:0000073!9.03e-08!94;UBERON:0001016!9.03e-08!94;UBERON:0002200!9.25e-08!11;UBERON:0006876!9.25e-08!11;UBERON:0001778!1.17e-07!3;UBERON:0001775!1.17e-07!3;UBERON:0005743!1.48e-07!86;UBERON:0000033!2.11e-07!123;UBERON:0000153!6.45e-07!129;UBERON:0007811!6.45e-07!129;UBERON:0002780!6.65e-07!41;UBERON:0001890!6.65e-07!41;UBERON:0006240!6.65e-07!41;UBERON:0001764!8.49e-07!1;UBERON:0001825!8.49e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.96e-14;3!UBERON:0001992;1.96e-14;3!UBERON:0002073;3.35e-09;5!UBERON:0003688;7.01e-08;6!UBERON:0002358;7.01e-08;6!UBERON:0003684;7.01e-08;6!UBERON:0001178;7.01e-08;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,1.83e-14,3;UBERON:0001992,1.83e-14,3;UBERON:0002073,3.22e-09,5;UBERON:0005086,3.22e-09,5;UBERON:0003688,7.25e-08,6;UBERON:0002358,7.25e-08,6;UBERON:0003684,7.25e-08,6;UBERON:0001178,7.25e-08,6 | |||
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|short_description=p4@CSRP2 | |||
}} | }} |
Latest revision as of 21:47, 24 September 2015
Short description: | p4@CSRP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CSRP2_5end |
Coexpression cluster: | C163_Skeletal_skeletal_Pericytes_Hepatic_rhabdomyosarcoma_throat_mesenchymal |
Association with transcript: | -33bp_to_AB528310, BT019913, DQ890975, DQ894149, U46006_5end |
EntrezGene: | CSRP2 |
HGNC: | 2470 |
UniProt: | Q16527 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
precursor B cell | 1.60e-14 | 3 |
hair follicle dermal papilla cell | 1.83e-14 | 3 |
stem cell of epidermis | 1.83e-14 | 3 |
adipocyte of omentum tissue | 2.09e-14 | 3 |
hair follicle cell | 3.22e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 1.83e-14 | 3 |
papillary layer of dermis | 1.83e-14 | 3 |
hair follicle | 3.22e-09 | 5 |
hair follicle placode | 3.22e-09 | 5 |
omentum | 7.25e-08 | 6 |
peritoneum | 7.25e-08 | 6 |
abdominal cavity | 7.25e-08 | 6 |
visceral peritoneum | 7.25e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 2.80e-11 | 4 |
bronchus cancer | 5.38e-07 | 7 |
bronchogenic carcinoma | 5.38e-07 | 7 |