FFCP PHASE1:Hg19::chr12:85673977..85674015,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:85673977..85674015,+
|short_description=p1@ALX1
|description=CAGE_peak_1_at_ALX1_5end
|association_with_transcript=-20bp_to_NM_006982,uc001tae.3_5end
|En...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=8092 | |EntrezGene=8092 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1494 | |HGNC=1494 | ||
|TSSclassifier=strong | |||
|UniProt=Q15699 | |UniProt=Q15699 | ||
|association_with_transcript=-20bp_to_NM_006982,uc001tae.3_5end | |||
|cluster_id=chr12:85673977..85674015,+ | |||
|description=CAGE_peak_1_at_ALX1_5end | |||
|id=chr12:85673977..85674015,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.72e-09!180;CL:0000333!2.28e-08!41;CL:0000133!6.97e-08!59;CL:0000148!7.58e-08!10;CL:0000541!7.58e-08!10;CL:0000710!4.93e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.78e-09;10!CL:0000333;1.23e-07;5!CL:0000147;2.38e-07;14!CL:0000710;3.19e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000333,8.91e-11,41;CL:0000148,1.84e-09,10;CL:0000541,1.84e-09,10;CL:0000133,1.00e-08,59;CL:0000147,2.12e-07,14;CL:0000710,3.37e-07,20 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!1.10e-09!22;DOID:2994!1.10e-09!22;DOID:0050687!2.45e-09!143 | |||
|ontology_enrichment_disease_v019=DOID:3095;2.28e-11;22!DOID:2994;2.28e-11;22!DOID:171;3.95e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0050687,3.96e-13,143;DOID:3095,2.68e-11,22;DOID:2994,2.68e-11,22;DOID:305,5.76e-09,106;DOID:171,5.10e-08,10;DOID:14566,2.54e-07,239;DOID:162,6.99e-07,235 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.23e-07;5!UBERON:0002410;1.23e-07;5!UBERON:0000010;2.25e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000013,1.30e-07,5;UBERON:0002410,1.30e-07,5;UBERON:0000010,2.37e-07,8 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,2.53299878168311,0,0.522371256399677,0.245733936501509,0,0,0,0,0,0,0,0,0,0.246242116153576,0.204000691244253,0,0,0,0.376627918784408,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0,0,0,0,0,0,0.567208902984407,0,0.175669571386252,0.327447688744282,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0.596287222100115,2.58070378531837,2.08284300964557,3.39184765154406,0.838998872419812,0.550236083880135,0.626984899610432,0,0.71153252537342,0,0,0,0,2.20597848207521,0,2.58969212023831,1.12264686313085,1.12611480483322,3.06633274931766,2.84779697870439,4.03043836646896,0,0,0,0,1.39293562831038,2.1185468930115,2.29469296599051,0.354668382198357,0,1.06748995729705,0,0.622422070799533,0,0.490385709340376,6.81108424402191,2.30470369792,7.49828581868149,7.80400192075801,0.570471821544449,3.73621701379503,1.29177948508141,0.161872944368132,0.280901613404497,4.49139176760765,6.87872176945901,5.78624374584287,5.94001428641027,0.494533858557114,0,0,11.6151918628306,9.13365195065338,2.49357703935765,0.877955241761676,0.30648779579902,0.300476117813194,0.113432183160021,0,0.427114777637135,0,0,0,0,0,0,0,0,0.0920498986422993,16.9728359659752,0,0,0,0,0,0,0.365921118388786,0.795178609928912,1.16193942869518,0.621966330092223,1.7662459561294,1.82488679537915,0,0,0,0,0,1.65629520055781,1.51726221070292,2.41011029883482,1.43382164552112,1.30727666455444,1.42362371466658,0.674156540800822,1.17732879075208,0.769494313892781,0,0,0,0,0,0,0,0,0.245976877086227,1.71567810298526,0,0,0,0,4.88712457965487,0,0,0.231860809950154,1.05667824812239,0.144366447761074,0,0,0,0,0,0,0,0.93733833986777,0,0,0,0,0,0,0,0,0.288239906833923,0,17.3984230360543,9.16772221339866,4.68869788840188,3.4214489204541,6.58095953301271,10.812350082381,9.1464458441785,8.40983132590205,2.61576041299968,10.7073897298587,0.129271715757778,0,3.381211010224,0,0,0.257207374262142,0,0.532844358032199,0,0,0,1.62868092146868,0,0,0,0,0,0,0,0,0,0,0,1.59259437334337,1.84928690295345,2.68591444859843,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0.542530047399471,7.27898015357825,9.09987842865525,13.8778125229863,0.35142424497814,1.20378439891088,2.27407504055985,3.10419213877515,0,0,1.56390506042549,2.15381273209015,2.05886054286514,0,0,0,0,0,0.30239029332968,0.496215615637554,0.153461973288062,0.561320188866147,0,0,0,0,4.47208112027701,0.355123450626254,3.94210348866284,2.07701771673448,2.32420756919918,0,0,0,0,0.182091168006717,0,0,0.385076685522074,0,0,0,0,0.170093705276516,0,0,1.62567862526312,1.50506932156456,0,0,0,0,0,0.512900250232778,0,0,0,2.93022287418699,3.54790849658528,0,0,0,0.773365746336976,0.308097234229289,0.614014698904518,0,3.86712881525785,0,0.0852266274161009,0.534192213880424,0,0,0,0,0,0.62962469366128,0,0.308033580176089,0.532306030317022,0,0,0,9.30395923399168,5.69482964493707,0.953150969619124,0.255897791311334,0,0,1.56989728039846,0,0,0,1.2130948894399,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0,0.578775534266688,1.9676842561399,0,0,0.281695602532241,1.86434757865267,0.294747123039363,0,5.67617702512956,0,0,6.07157078025144,1.74967360122491,0.577332676353072,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.534120355637366,0,3.67560323971548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37964840739304,2.46043718681657,3.50383197595008,0,2.78406173895242,0,0,0,0,0,0.879049075631364,0,0,0,0,0,0,0,0,2.78271762557265,0,0,0,0,6.80218419206545,0,0,0.311039587661807,0,0,0,0.789147245095469,0,0,0,0,0,0,0,1.44999915086959,0,0,0,2.06846023944879,0.291604613383254,7.98674976693144,0,0.120596438625408,0,0,0,0.219385397153973,0.653630781113941,0,1.92375646259493,0,1.1528195219403,0.359030577639089,0,0,0,0,0,0,0.498635045700469,0,0,0,1.51802986179348,0,3.58696709697646,0,0,5.40971599355228,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0.394584402849391,0,0.61214552326098,0.63186579628488,4.66002600184927,9.33193722575224,0.664653872707185,2.64793564700399,2.19753042885058,2.38944859545918,1.99226682220855,0,0,0.0979923974143777,0,1.04836000945218,0.171986032471617,14.5134496933628,17.8337933690293,15.9303986683226,0.0969890164884194,0,2.48578814858586,0,6.16015296279268,0.0633107959558787,0.782205530939212,3.76746455182208,0,0.799238438328521,0,0,5.8342299273068,0,0,0,0,0,0,10.1132706465532,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,1.18112977817699,0,0,0,0.803765742325096,0.412618309791701,1.24632101408756,0,0,0,0,1.10327990218877,5.08809504909482,0.739202355635845,0.717149357331379,0,0,0,0,0,0,0,0,0,0,6.91203758272767,0,0,0,0,10.9495576245971,0,0,0,0,0,0,0,1.91502377331055,0,0.2506898940227,1.53172788381731,3.60659893780785,1.25643277000187,0,0,0,0,0,0,8.02422082630139,3.37447101497688,8.03740322970734,11.4186133417987,0,1.40500471742064,1.44921028610825,2.08956724041624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| 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| ||
|short_description=p1@ALX1 | |||
}} | }} |
Latest revision as of 03:58, 25 September 2015
Short description: | p1@ALX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ALX1_5end |
Coexpression cluster: | NA |
Association with transcript: | -20bp_to_NM_006982, uc001tae.3_5end |
EntrezGene: | ALX1 |
HGNC: | 1494 |
UniProt: | Q15699 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
migratory neural crest cell | 8.91e-11 | 41 |
melanocyte | 1.84e-09 | 10 |
melanoblast | 1.84e-09 | 10 |
neurectodermal cell | 1.00e-08 | 59 |
pigment cell | 2.12e-07 | 14 |
neurecto-epithelial cell | 3.37e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
sympathetic nervous system | 1.30e-07 | 5 |
autonomic nervous system | 1.30e-07 | 5 |
peripheral nervous system | 2.37e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cell type cancer | 3.96e-13 | 143 |
germ cell and embryonal cancer | 2.68e-11 | 22 |
germ cell cancer | 2.68e-11 | 22 |
carcinoma | 5.76e-09 | 106 |
neuroectodermal tumor | 5.10e-08 | 10 |
disease of cellular proliferation | 2.54e-07 | 239 |
cancer | 6.99e-07 | 235 |