FFCP PHASE1:Hg19::chr12:8975979..8975986,+: Difference between revisions
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|id=chr12:8975979..8975986,+
|short_description=p19@A2ML1
|description=CAGE_peak_19_at_A2ML1_5end
|association_with_transcript=-122bp_to_ENST00000537546_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=144568 | |EntrezGene=144568 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23336 | |HGNC=23336 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-122bp_to_ENST00000537546_5end | |||
|cluster_id=chr12:8975979..8975986,+ | |||
|coexpression_cluster_id=C45 | |||
|description=CAGE_peak_19_at_A2ML1_5end | |||
|id=chr12:8975979..8975986,+ | |||
|ontology_enrichment_celltype=CL:0000039!4.09e-16!7;CL:0000586!4.09e-16!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;1.78e-29;7!CL:0000586;1.78e-29;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.78e-29,7;CL:0000586,1.78e-29,7 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.81e-21;10!UBERON:0005564;3.81e-21;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3095;1.80e-10;22!DOID:2994;1.80e-10;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,1.80e-10,22;DOID:2994,1.80e-10,22 | |||
|ontology_enrichment_uberon=UBERON:0006331!6.87e-36!3;UBERON:0002148!1.45e-24!2;UBERON:0009662!1.45e-24!2;UBERON:0000473!4.66e-24!8;UBERON:0003135!1.37e-17!11;UBERON:0000988!1.00e-16!3;UBERON:0002298!6.88e-14!8;UBERON:0007029!2.06e-13!1;UBERON:0002038!3.76e-13!1;UBERON:0009661!3.76e-13!1;UBERON:0002336!4.23e-13!1;UBERON:0001018!4.23e-13!1;UBERON:0002473!4.23e-13!1;UBERON:0005340!4.23e-13!1;UBERON:0002316!4.23e-13!1;UBERON:0003544!4.23e-13!1;UBERON:0001020!4.23e-13!1;UBERON:0005970!4.23e-13!1;UBERON:0002437!4.23e-13!1;UBERON:0002902!8.64e-13!1;UBERON:0009899!8.64e-13!1;UBERON:0007190!9.73e-13!1;UBERON:0002308!2.06e-12!9;UBERON:0000125!2.06e-12!9;UBERON:0001049!4.58e-12!57;UBERON:0005068!4.58e-12!57;UBERON:0006241!4.58e-12!57;UBERON:0007135!4.58e-12!57;UBERON:0007023!8.24e-11!115;UBERON:0001017!3.41e-10!82;UBERON:0005743!1.11e-09!86;UBERON:0000955!1.15e-09!69;UBERON:0006238!1.15e-09!69;UBERON:0000991!2.49e-09!21;UBERON:0009196!2.49e-09!21;UBERON:0009117!2.49e-09!21;UBERON:0005564!2.49e-09!21;UBERON:0002616!6.16e-09!59;UBERON:0004176!6.48e-09!22;UBERON:0003101!6.48e-09!22;UBERON:0000079!6.48e-09!22;UBERON:0000073!1.11e-08!94;UBERON:0001016!1.11e-08!94;UBERON:0002020!2.50e-08!34;UBERON:0003528!2.50e-08!34;UBERON:0001893!2.93e-08!34;UBERON:0003075!9.41e-08!86;UBERON:0007284!9.41e-08!86;UBERON:0003076!1.14e-07!15;UBERON:0003057!1.14e-07!15;UBERON:0002346!2.26e-07!90;UBERON:0002950!3.28e-07!2;UBERON:0001891!3.28e-07!2;UBERON:0009616!3.28e-07!2;UBERON:0005162!3.48e-07!2;UBERON:0000122!3.48e-07!2;UBERON:0002780!7.30e-07!41;UBERON:0001890!7.30e-07!41;UBERON:0006240!7.30e-07!41 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;5.22e-26;8!UBERON:0003135;2.25e-19;11!UBERON:0000991;6.74e-11;21!UBERON:0003101;1.80e-10;22!UBERON:0000079;1.80e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,5.22e-26,8;UBERON:0003135,2.25e-19,11;UBERON:0000991,6.74e-11,21;UBERON:0009196,6.74e-11,21;UBERON:0009117,6.74e-11,21;UBERON:0005564,6.74e-11,21;UBERON:0004176,1.80e-10,22;UBERON:0003101,1.80e-10,22;UBERON:0000079,1.80e-10,22 | |||
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|short_description=p19@A2ML1 | |||
}} | }} |
Latest revision as of 07:16, 25 September 2015
Short description: | p19@A2ML1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_19_at_A2ML1_5end |
Coexpression cluster: | C45_testicular_choriocarcinoma_H9_teratocarcinoma_Wilms_pancreatic_iPS |
Association with transcript: | -122bp_to_ENST00000537546_5end |
EntrezGene: | A2ML1 |
HGNC: | 23336 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.78e-29 | 7 |
germ cell | 1.78e-29 | 7 |
Ontology term | p-value | n |
---|---|---|
testis | 5.22e-26 | 8 |
male reproductive organ | 2.25e-19 | 11 |
gonad | 6.74e-11 | 21 |
indifferent external genitalia | 6.74e-11 | 21 |
indifferent gonad | 6.74e-11 | 21 |
gonad primordium | 6.74e-11 | 21 |
external genitalia | 1.80e-10 | 22 |
male organism | 1.80e-10 | 22 |
male reproductive system | 1.80e-10 | 22 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 1.80e-10 | 22 |
germ cell cancer | 1.80e-10 | 22 |