FFCP PHASE1:Hg19::chr6:168479694..168479708,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79981 | |EntrezGene=79981 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21240 | |HGNC=21240 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N878 | |UniProt=Q8N878 | ||
|association_with_transcript=88bp_to_BC137144_5end | |association_with_transcript=88bp_to_BC137144_5end | ||
|cluster_id=chr6:168479694..168479708,- | |||
|coexpression_cluster_id=C201 | |||
|description=CAGE_peak_3_at_FRMD1_5end | |description=CAGE_peak_3_at_FRMD1_5end | ||
|id=chr6:168479694..168479708,- | |id=chr6:168479694..168479708,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.16e-29;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.03e-18!27;UBERON:0000059!7.38e-16!11;UBERON:0005409!7.15e-14!35;UBERON:0001155!9.43e-13!9;UBERON:0007023!1.20e-11!115;UBERON:0001154!2.52e-08!1;UBERON:0001153!2.52e-08!1;UBERON:0005418!3.11e-08!1;UBERON:0001389!3.11e-08!1;UBERON:0000026!3.11e-08!1;UBERON:0008784!3.11e-08!1;UBERON:0006058!3.11e-08!1;UBERON:0003663!3.11e-08!1;UBERON:0001383!3.11e-08!1;UBERON:0004256!3.11e-08!1;UBERON:0002529!3.11e-08!1;UBERON:0004708!3.11e-08!1;UBERON:0002101!3.11e-08!1;UBERON:0004709!3.11e-08!1;UBERON:0003661!3.11e-08!1;UBERON:0002471!3.11e-08!1;UBERON:0004357!3.11e-08!1;UBERON:0009872!3.11e-08!1;UBERON:0004347!3.11e-08!1;UBERON:0005420!3.11e-08!1;UBERON:0005732!3.11e-08!1;UBERON:0006057!3.11e-08!1;UBERON:0000978!3.11e-08!1;UBERON:0002103!3.11e-08!1;UBERON:0001665!3.11e-08!1;UBERON:0003823!3.11e-08!1;UBERON:0000154!3.11e-08!1;UBERON:0005733!3.11e-08!1;UBERON:0005730!3.11e-08!1;UBERON:0000989!4.11e-08!1;UBERON:0008811!4.11e-08!1;UBERON:0006258!4.11e-08!1;UBERON:0005876!4.11e-08!1;UBERON:0004874!4.11e-08!1;UBERON:0002038!4.71e-08!1;UBERON:0009661!4.71e-08!1;UBERON:0002108!3.67e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000059;5.75e-64;11!UBERON:0001155;1.93e-50;9!UBERON:0000160;2.37e-39;17!UBERON:0005409;6.31e-31;22!UBERON:0001154;3.16e-29;1!UBERON:0001153;3.16e-29;1!UBERON:0009854;3.16e-29;1!UBERON:0004907;2.27e-23;5!UBERON:0004921;2.34e-21;33!UBERON:0001007;1.35e-08;81!UBERON:0001555;1.39e-08;54!UBERON:0001052;2.43e-08;4!UBERON:0009856;2.43e-08;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,6.55e-64,11;UBERON:0001155,2.19e-50,9;UBERON:0000160,2.56e-39,17;UBERON:0001154,4.20e-29,1;UBERON:0001153,4.20e-29,1;UBERON:0001045,4.20e-29,1;UBERON:0005409,2.13e-27,25;UBERON:0004907,2.54e-23,5;UBERON:0001052,2.43e-08,4;UBERON:0001046,7.18e-07,19 | |||
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|short_description=p3@FRMD1 | |short_description=p3@FRMD1 | ||
}} | }} |
Latest revision as of 22:17, 16 September 2015
Short description: | p3@FRMD1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FRMD1_5end |
Coexpression cluster: | C201_colon_small_adenocarcinoma_duodenum_temporal_signet_gall |
Association with transcript: | 88bp_to_BC137144_5end |
EntrezGene: | FRMD1 |
HGNC: | 21240 |
UniProt: | Q8N878 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
large intestine | 6.55e-64 | 11 |
colon | 2.19e-50 | 9 |
intestine | 2.56e-39 | 17 |
vermiform appendix | 4.20e-29 | 1 |
caecum | 4.20e-29 | 1 |
midgut | 4.20e-29 | 1 |
gastrointestinal system | 2.13e-27 | 25 |
lower digestive tract | 2.54e-23 | 5 |
rectum | 2.43e-08 | 4 |
hindgut | 7.18e-07 | 19 |