FFCP PHASE1:Hg19::chr20:34693828..34693831,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:34693828..34693831,+ | |||
|description=CAGE_peak_at_chr20:34693828..34693831,+ | |description=CAGE_peak_at_chr20:34693828..34693831,+ | ||
|id=chr20:34693828..34693831,+ | |id=chr20:34693828..34693831,+ | ||
|ontology_enrichment_celltype=CL:0000650!9.89e-07!3;CL:1000618!9.89e-07!3;CL:1001318!9.89e-07!3;CL:0002173!9.89e-07!3;CL:1000500!9.89e-07!3 | |ontology_enrichment_celltype=CL:0000650!9.89e-07!3;CL:1000618!9.89e-07!3;CL:1001318!9.89e-07!3;CL:0002173!9.89e-07!3;CL:1000500!9.89e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000313;7.88e-13;1!CL:0000159;4.82e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,7.89e-13,1;CL:0000159,4.83e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0001045;2.91e-12;1!UBERON:0006242;2.91e-12;1!UBERON:0003918;1.14e-10;10!UBERON:0007687;1.14e-10;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2152;7.88e-13;1!DOID:4468;9.27e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,7.89e-13,1;DOID:4468,7.20e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0000160!1.30e-14!27;UBERON:0006947!9.54e-14!3;UBERON:0004054!9.54e-14!3;UBERON:0005409!3.61e-13!35;UBERON:0002113!1.15e-11!27;UBERON:0003918!1.15e-11!27;UBERON:0005095!1.15e-11!27;UBERON:0007687!1.15e-11!27;UBERON:0005904!1.97e-10!4;UBERON:0000059!2.13e-10!11;UBERON:0000489!1.35e-09!32;UBERON:0000058!1.91e-09!26;UBERON:0001155!1.30e-08!9;UBERON:0006554!3.92e-08!44;UBERON:0000080!5.44e-08!18;UBERON:0002120!5.44e-08!18;UBERON:0004875!5.44e-08!18;UBERON:0005721!5.44e-08!18;UBERON:0005754!5.44e-08!18;UBERON:0007297!5.44e-08!18;UBERON:0001008!6.51e-08!45;UBERON:0001007!1.10e-07!155;UBERON:0001555!1.10e-07!155;UBERON:0007026!1.10e-07!155;UBERON:0005172!1.75e-07!55;UBERON:0005173!1.75e-07!55;UBERON:0004876!3.92e-07!20;UBERON:0004921!5.07e-07!129;UBERON:0004185!5.07e-07!129;UBERON:0005177!6.44e-07!107;UBERON:0003887!9.15e-07!21;UBERON:0003567!9.89e-07!3;UBERON:0003838!9.89e-07!3;UBERON:0005169!9.89e-07!3;UBERON:0002321!9.89e-07!3;UBERON:0005215!9.89e-07!3;UBERON:0002303!9.89e-07!3;UBERON:0002319!9.89e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;1.87e-29;17!UBERON:0005409;6.10e-23;22!UBERON:0001155;4.75e-20;9!UBERON:0000059;1.84e-16;11!UBERON:0004921;6.25e-14;33!UBERON:0004911;7.88e-13;1!UBERON:0001154;2.91e-12;1!UBERON:0001153;2.91e-12;1!UBERON:0009854;2.91e-12;1!UBERON:0002108;1.11e-09;4!UBERON:0002294;3.67e-07;7!UBERON:0001173;3.67e-07;7!UBERON:0004909;4.82e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.79e-29,17;UBERON:0005409,3.04e-20,25;UBERON:0001155,3.37e-20,9;UBERON:0000059,1.39e-16,11;UBERON:0004911,7.89e-13,1;UBERON:0001154,1.96e-12,1;UBERON:0001153,1.96e-12,1;UBERON:0001045,1.96e-12,1;UBERON:0002108,1.57e-09,4;UBERON:0004909,4.83e-07,2 | |||
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| ||
|short_description=p@chr20:34693828..34693831,+ | |short_description=p@chr20:34693828..34693831,+ | ||
}} | }} |
Latest revision as of 13:31, 28 July 2015
Short description: | p@chr20:34693828..34693831, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:34693828..34693831, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 7.89e-13 | 1 |
seromucus secreting cell | 4.83e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.79e-29 | 17 |
gastrointestinal system | 3.04e-20 | 25 |
colon | 3.37e-20 | 9 |
large intestine | 1.39e-16 | 11 |
epithelium of female gonad | 7.89e-13 | 1 |
vermiform appendix | 1.96e-12 | 1 |
caecum | 1.96e-12 | 1 |
midgut | 1.96e-12 | 1 |
small intestine | 1.57e-09 | 4 |
epithelium of gonad | 4.83e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 7.89e-13 | 1 |
clear cell adenocarcinoma | 7.20e-07 | 2 |