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FFCP PHASE1:Hg19::chr13:32889688..32889697,+: Difference between revisions

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(Created page with "{{FFCP |id=chr13:32889688..32889697,+ |short_description=p4@BRCA2 |description=CAGE_peak_4_at_BRCA2_5end |association_with_transcript=46bp_to_ENST00000530893_5end |Entrez...")
 
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{{FFCP
{{FFCP
|id=chr13:32889688..32889697,+
|DHSsupport=supported 
|short_description=p4@BRCA2
|DPIdataset=robust
|description=CAGE_peak_4_at_BRCA2_5end
|association_with_transcript=46bp_to_ENST00000530893_5end
|EntrezGene=675
|EntrezGene=675
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=1101
|HGNC=1101
|TSSclassifier=strong
|UniProt=E9PIQ1
|UniProt=E9PIQ1
|association_with_transcript=46bp_to_ENST00000530893_5end
|cluster_id=chr13:32889688..32889697,+
|description=CAGE_peak_4_at_BRCA2_5end
|id=chr13:32889688..32889697,+
|ontology_enrichment_celltype=CL:0000037!3.92e-12!172;CL:0000566!3.92e-12!172;CL:0000988!5.86e-12!182;CL:0002032!1.00e-10!165;CL:0000837!1.00e-10!165;CL:0000542!3.01e-08!53;CL:0000051!3.01e-08!53;CL:0000548!9.49e-08!679;CL:0000004!9.49e-08!679;CL:0000255!9.49e-08!679;CL:0000838!9.71e-08!52;CL:0000012!1.01e-07!682;CL:0000219!3.68e-07!390
|ontology_enrichment_celltype_v019=CL:0000945;5.25e-16;24!CL:0000451;2.89e-13;10!CL:0000784;9.57e-11;3!CL:0000453;5.59e-10;5!CL:0000990;1.70e-08;8!CL:0001014;4.64e-07;2!CL:0001016;4.64e-07;2!CL:0002253;4.64e-07;2!CL:0000542;6.92e-07;53
|ontology_enrichment_celltype_v019_2=CL:0000945,2.91e-16,24;CL:0000826,2.91e-16,24;CL:0000451,1.30e-13,10;CL:0000542,2.84e-11,53;CL:0000051,2.84e-11,53;CL:0000784,4.19e-11,3;CL:0000817,2.04e-10,3;CL:0000988,3.50e-10,177;CL:0000453,3.78e-10,5;CL:0000838,5.90e-10,52;CL:0000990,1.25e-08,8;CL:0000037,2.11e-08,168;CL:0000738,4.29e-08,136;CL:0000785,2.85e-07,2;CL:0000955,2.85e-07,2;CL:0000818,2.85e-07,2;CL:0000954,2.85e-07,2;CL:0000816,2.85e-07,2;CL:0002253,3.23e-07,2;CL:0001014,5.15e-07,2;CL:0001016,5.15e-07,2
|ontology_enrichment_development_v019=CL:0000954;4.64e-07;2!CL:0000051;6.92e-07;53
|ontology_enrichment_disease=DOID:162!1.17e-28!235;DOID:14566!4.16e-28!239;DOID:2531!4.94e-17!51;DOID:0060083!4.94e-17!51;DOID:0050686!8.24e-17!137;DOID:0050687!5.48e-14!143;DOID:1240!2.43e-11!39;DOID:3095!6.57e-09!22;DOID:2994!6.57e-09!22;DOID:305!1.14e-08!106;DOID:8692!2.08e-07!31;DOID:0060058!9.36e-07!10
|ontology_enrichment_disease_v019=DOID:0060058;8.16e-08;10
|ontology_enrichment_disease_v019_2=DOID:2531,3.76e-09,51;DOID:0060083,3.76e-09,51;DOID:0060058,4.95e-08,10
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019=
|ontology_enrichment_uberon_v019_2=
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|short_description=p4@BRCA2
}}
}}

Latest revision as of 04:01, 17 September 2015

Short description:p4@BRCA2
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_4_at_BRCA2_5end
Coexpression cluster:NA
Association with transcript: 46bp_to_ENST00000530893_5end
EntrezGene:BRCA2
HGNC: 1101
UniProt: E9PIQ1
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data