FFCP PHASE1:Hg19::chr6:7580738..7580758,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:7580738..7580758,+ | |||
|coexpression_cluster_id=C324 | |||
|description=CAGE_peak_at_chr6:7580738..7580758,+ | |description=CAGE_peak_at_chr6:7580738..7580758,+ | ||
|id=chr6:7580738..7580758,+ | |id=chr6:7580738..7580758,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.33e-20!254;CL:0002076!1.41e-11!43;CL:0002251!6.50e-11!21;CL:0000223!3.26e-10!59;CL:0000039!3.63e-08!7;CL:0000586!3.63e-08!7 | |ontology_enrichment_celltype=CL:0000066!1.33e-20!254;CL:0002076!1.41e-11!43;CL:0002251!6.50e-11!21;CL:0000223!3.26e-10!59;CL:0000039!3.63e-08!7;CL:0000586!3.63e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0002623;9.41e-15;3!CL:0000240;6.32e-12;6!CL:0000311;6.32e-12;6!CL:0000079;6.32e-12;6!CL:0000237;6.32e-12;6!CL:0000349;1.03e-10;19!CL:0002251;2.37e-10;20!CL:0000622;4.96e-09;5!CL:0002537;1.04e-08;5!CL:0000312;1.80e-08;5!CL:0002076;3.86e-08;42!CL:0000154;1.37e-07;6!CL:0002541;4.69e-07;3!CL:0002231;4.69e-07;3!CL:0002178;8.79e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,8.65e-15,3;CL:0000240,1.38e-11,6;CL:0000311,1.38e-11,6;CL:0000079,1.38e-11,6;CL:0000237,1.38e-11,6;CL:0000036,1.38e-11,6;CL:0000357,1.38e-11,6;CL:0000114,1.38e-11,6;CL:0002076,7.85e-11,42;CL:0000349,9.41e-11,19;CL:0002251,2.36e-10,20;CL:0000622,4.72e-09,5;CL:0002537,1.17e-08,5;CL:0000312,2.78e-08,5;CL:0000154,1.31e-07,6;CL:0000223,2.93e-07,58;CL:0002541,3.37e-07,3;CL:0002231,4.86e-07,3;CL:0002178,6.75e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000357;6.32e-12;6!CL:0000114;6.32e-12;6 | |||
|ontology_enrichment_disease=DOID:305!1.01e-19!106;DOID:0050687!2.42e-15!143;DOID:162!1.97e-09!235;DOID:14566!8.77e-09!239;DOID:1749!3.03e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:114;3.50e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.52e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001004!6.96e-11!72;UBERON:0004119!1.24e-09!169;UBERON:0000925!1.24e-09!169;UBERON:0006595!1.24e-09!169;UBERON:0001007!6.68e-09!155;UBERON:0001555!6.68e-09!155;UBERON:0007026!6.68e-09!155;UBERON:0004921!7.64e-08!129;UBERON:0004185!7.64e-08!129;UBERON:0000065!1.32e-07!53;UBERON:0000166!1.77e-07!21;UBERON:0001557!5.00e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;3.36e-11;10!UBERON:0000158;3.36e-11;10!UBERON:0001041;3.88e-11;14!UBERON:0000478;2.77e-08;24!UBERON:0001044;1.37e-07;6!UBERON:0003293;1.37e-07;6!UBERON:0003294;1.37e-07;6!UBERON:0010047;1.37e-07;6!UBERON:0003408;1.37e-07;6!UBERON:0000167;1.37e-07;6!UBERON:0001723;1.90e-07;3!UBERON:0001033;1.90e-07;3!UBERON:0000165;2.42e-07;28!UBERON:0003124;4.69e-07;3!UBERON:0000920;4.69e-07;3!UBERON:0003978;8.79e-07;3!UBERON:0000946;8.79e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000478,2.58e-08,24;UBERON:0005631,5.88e-08,14;UBERON:0000158,5.88e-08,14;UBERON:0001044,1.31e-07,6;UBERON:0003293,1.31e-07,6;UBERON:0003294,1.31e-07,6;UBERON:0010047,1.31e-07,6;UBERON:0000167,1.31e-07,6;UBERON:0001723,1.60e-07,3;UBERON:0001033,1.60e-07,3;UBERON:0010056,1.60e-07,3;UBERON:0000166,2.79e-07,22;UBERON:0000920,3.37e-07,3;UBERON:0000161,3.62e-07,36;UBERON:0003978,4.57e-07,3;UBERON:0009751,4.57e-07,3;UBERON:0000946,4.57e-07,3;UBERON:0002523,4.57e-07,3;UBERON:0005983,4.57e-07,3;UBERON:0002165,4.57e-07,3;UBERON:0002062,4.57e-07,3;UBERON:0007280,4.57e-07,3;UBERON:0000165,4.84e-07,29;UBERON:0000930,4.84e-07,29 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.140954404095971,0,0,0,0,0,0,0,0,0,0.527533956456907,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0.496971951695318,0,0,0,0,0,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0.300091096084402,0,0.515281080091258,0.18611685633159,0.168776332241266,0.0974370051611986,0,0.0920498986422993,0.161646056818812,0,0,0.339121184620975,0.386521706326594,0.272746120590835,0,0.121973706129595,0,0,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0.354920400119532,0.674338760312407,0.723033089650446,0.110293972732394,0.435758888184812,0.474541238222193,0.269662616320329,0.392442930250692,0,0,0,0,0,0,0,0,0,0.245976877086227,0,1.42675371031213,1.1240175325762,1.10581869652794,1.11106134190236,0,0,0,0,0.117408694235822,0,0,1.14152491340759,0.790204397959275,0,0,0,0,0,0.335964256397719,0.425325291727159,0.985143749731331,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0.325736184293735,0,0,0.602878754119172,0,0.599837947092342,0,0,2.10833939483032,1.4377491329495,1.14861935834114,0,0,0.205476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0.535286966391485,0.473107245101804,0.35142424497814,0,0,0,0.664225598535437,0,0,0,0,0,0,0,0,0,0,0.496215615637554,1.38115775959256,0.280660094433074,0,0,0,0,0,0.177561725313127,0,0,0,0.241718899183244,1.20303882181971,2.67034867914099,0,0,0,0,0.462092022626489,0,0,0.105551628892876,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,1.14851441245126,0.910420027699949,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192444225451024,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.640944426764839,0,1.47024129588619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,0,0,0,1.67121139316383,0,2.15012491469462,0,0,0,0,0,0,0,2.51932747854276,0.20453736500431,0,0.311039587661807,0.269605053441981,0,0,0,0,0,0,0,0,1.04171104434093,0.0874599999961957,0,0.1137934482855,0,1.41832609060762,0,0,0,0,0,0,0,0,0,0.10893846351899,1.25481369850743,0.0769502585037971,0,0.69169171316418,1.43612231055635,2.06430006651815,1.91400695839152,0,2.13213910407454,0,0,0,0,0,0,0,0,1.05499032264014,0,0,0.216388639742091,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0.31593289814244,0,0.207376382794494,0,0,0,0,0,0,1.21491816834592,0.293977192243133,0.174118413160805,0.17472666824203,0,0,0.219267951258557,0.410577285266046,1.16386819786103,0,0.451961481561065,0,0,0,0.391102765469606,0.0801588202515337,0,1.59847687665704,1.29681375438695,0,0.343189995723929,0,0,0.942776138467182,0.135904206073614,0,0,0,0,0,0,0.429765441419957,0,1.67569440763353,1.60412296808179,0,2.39614800598789,1.28767814440971,0,0.335917362433631,0.360299883542404,0,0.630265458457789,0.164831716762333,0.26961417541674,0.0984274815147488,0,0,0,0.482259445395058,0.412618309791701,0.415440338029185,0,0.77380195455795,0,0.670869375198532,0.0788057072991982,0,0,0,0.191915197319445,0,2.64836788146173,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0.276697269872462,0.124980407962107,0,0.570930667089935,0.705797459094515,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0,0,0.796191777397232,0,0,0.336749488765919,0,0,0,0,0.226705925512272,0.231522474323834,0.97894681802587,0,0,0.219284049578707,0,0,0,0.76872455576384,0.345430341731199,0.607719912354764,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0.392590874004102,0.11796972334774,5.31942935712869,0.577628330751691,0,0,0.198916222116275,0,0,0,0.261906694481422,0.327543835020193,0,0,0,0,0,0,0.548257766857182,1.98484471355718,0,0.383287282918786,0,0.336283722218824,0,0,0.177404740325278,0,0,0,0,0,0.222462803784138,0,0,0.280272163313789,0,0,0.47775168788705,0,0.316027223465453,0,0,0,1.24329698497822,2.7314956335032,3.45629830907046,0,0,0,0.423387050190929,0.22910686854405,0,0,0.894843454382338,0.294450700845729,0,0,0,0,0.485710993059139,0,2.38740930193642,0,0.22589216407792,0.109940516745429,0.452888530700021,0.0771741581079447,0.655678681511872,0.470317296361523,0,0,0.196308467114945,0,0.8453114551668,0.169927114687817,0,0,0,0,0.352894871715692,0.0802413666891683,0,0.917458566809082,0,0,0,0,0.5290268405154,0,0,1.29787968637137,0,0.327796715891087,0.126698501011437,0.509944148709909,0.534434810531121,0.643264296743914,2.005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| ||
|short_description=p@chr6:7580738..7580758,+ | |short_description=p@chr6:7580738..7580758,+ | ||
}} | }} |
Latest revision as of 03:11, 31 July 2015
Short description: | p@chr6:7580738..7580758, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:7580738..7580758, + |
Coexpression cluster: | C324_tongue_salivary_oral_Prostate_amniotic_chorionic_small |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 8.65e-15 | 3 |
stratified squamous epithelial cell | 1.38e-11 | 6 |
keratin accumulating cell | 1.38e-11 | 6 |
stratified epithelial cell | 1.38e-11 | 6 |
keratinizing barrier epithelial cell | 1.38e-11 | 6 |
epithelial fate stem cell | 1.38e-11 | 6 |
stratified epithelial stem cell | 1.38e-11 | 6 |
surface ectodermal cell | 1.38e-11 | 6 |
endo-epithelial cell | 7.85e-11 | 42 |
extraembryonic cell | 9.41e-11 | 19 |
epithelial cell of alimentary canal | 2.36e-10 | 20 |
acinar cell | 4.72e-09 | 5 |
amnion mesenchymal stem cell | 1.17e-08 | 5 |
keratinocyte | 2.78e-08 | 5 |
protein secreting cell | 1.31e-07 | 6 |
endodermal cell | 2.93e-07 | 58 |
chorionic membrane mesenchymal stem cell | 3.37e-07 | 3 |
epithelial cell of prostate | 4.86e-07 | 3 |
epithelial cell of stomach | 6.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic structure | 2.58e-08 | 24 |
extraembryonic membrane | 5.88e-08 | 14 |
membranous layer | 5.88e-08 | 14 |
saliva-secreting gland | 1.31e-07 | 6 |
gland of oral region | 1.31e-07 | 6 |
gland of foregut | 1.31e-07 | 6 |
oral gland | 1.31e-07 | 6 |
oral cavity | 1.31e-07 | 6 |
tongue | 1.60e-07 | 3 |
gustatory system | 1.60e-07 | 3 |
future tongue | 1.60e-07 | 3 |
oral opening | 2.79e-07 | 22 |
egg chorion | 3.37e-07 | 3 |
orifice | 3.62e-07 | 36 |
valve | 4.57e-07 | 3 |
cardiac mesenchyme | 4.57e-07 | 3 |
cardial valve | 4.57e-07 | 3 |
tunica intima | 4.57e-07 | 3 |
heart layer | 4.57e-07 | 3 |
endocardium | 4.57e-07 | 3 |
endocardial cushion | 4.57e-07 | 3 |
presumptive endocardium | 4.57e-07 | 3 |
mouth | 4.84e-07 | 29 |
stomodeum | 4.84e-07 | 29 |
Ontology term | p-value | n |
---|---|---|
heart disease | 3.52e-10 | 2 |