FFCP PHASE1:Hg19::chr21:45161412..45161419,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8566 | |EntrezGene=8566 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8819 | |HGNC=8819 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=55bp_to_ENST00000398078_5end | |association_with_transcript=55bp_to_ENST00000398078_5end | ||
|cluster_id=chr21:45161412..45161419,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_36_at_PDXK_5end | |description=CAGE_peak_36_at_PDXK_5end | ||
|id=chr21:45161412..45161419,+ | |id=chr21:45161412..45161419,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;6.99e-21;10!UBERON:0005564;6.99e-21;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001874!5.93e-26!1;UBERON:0001882!7.62e-26!1;UBERON:0005403!7.62e-26!1;UBERON:0002022!1.26e-25!1;UBERON:0000369!1.43e-25!4;UBERON:0002435!1.43e-25!4;UBERON:0000204!1.43e-25!4;UBERON:0010082!1.43e-25!4;UBERON:0009663!4.37e-15!7;UBERON:0000473!1.51e-13!8;UBERON:0002308!5.83e-12!9;UBERON:0002420!5.83e-12!9;UBERON:0000125!5.83e-12!9;UBERON:0007245!5.83e-12!9;UBERON:0010009!5.83e-12!9;UBERON:0010011!5.83e-12!9;UBERON:0000454!5.83e-12!9;UBERON:0003135!4.03e-10!11;UBERON:0005383!1.41e-09!3;UBERON:0005382!1.41e-09!3;UBERON:0001896!1.67e-09!3;UBERON:0005290!1.67e-09!3;UBERON:0010096!1.67e-09!3;UBERON:0007023!7.79e-08!115;UBERON:0001869!2.21e-07!32;UBERON:0001049!3.32e-07!57;UBERON:0005068!3.32e-07!57;UBERON:0006241!3.32e-07!57;UBERON:0007135!3.32e-07!57;UBERON:0002791!3.51e-07!33;UBERON:0002020!5.41e-07!34;UBERON:0003528!5.41e-07!34;UBERON:0001893!5.41e-07!34;UBERON:0002616!5.62e-07!59 | |ontology_enrichment_uberon=UBERON:0001874!5.93e-26!1;UBERON:0001882!7.62e-26!1;UBERON:0005403!7.62e-26!1;UBERON:0002022!1.26e-25!1;UBERON:0000369!1.43e-25!4;UBERON:0002435!1.43e-25!4;UBERON:0000204!1.43e-25!4;UBERON:0010082!1.43e-25!4;UBERON:0009663!4.37e-15!7;UBERON:0000473!1.51e-13!8;UBERON:0002308!5.83e-12!9;UBERON:0002420!5.83e-12!9;UBERON:0000125!5.83e-12!9;UBERON:0007245!5.83e-12!9;UBERON:0010009!5.83e-12!9;UBERON:0010011!5.83e-12!9;UBERON:0000454!5.83e-12!9;UBERON:0003135!4.03e-10!11;UBERON:0005383!1.41e-09!3;UBERON:0005382!1.41e-09!3;UBERON:0001896!1.67e-09!3;UBERON:0005290!1.67e-09!3;UBERON:0010096!1.67e-09!3;UBERON:0007023!7.79e-08!115;UBERON:0001869!2.21e-07!32;UBERON:0001049!3.32e-07!57;UBERON:0005068!3.32e-07!57;UBERON:0006241!3.32e-07!57;UBERON:0007135!3.32e-07!57;UBERON:0002791!3.51e-07!33;UBERON:0002020!5.41e-07!34;UBERON:0003528!5.41e-07!34;UBERON:0001893!5.41e-07!34;UBERON:0002616!5.62e-07!59 | ||
|ontology_enrichment_uberon_v019=UBERON:0000473;8.65e-26;8!UBERON:0003135;4.28e-19;11!UBERON:0000991;1.53e-10;21!UBERON:0003101;4.14e-10;22!UBERON:0000079;4.14e-10;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,8.65e-26,8;UBERON:0003135,4.28e-19,11;UBERON:0000991,1.53e-10,21;UBERON:0009196,1.53e-10,21;UBERON:0009117,1.53e-10,21;UBERON:0005564,1.53e-10,21;UBERON:0004176,4.14e-10,22;UBERON:0003101,4.14e-10,22;UBERON:0000079,4.14e-10,22 | |||
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|short_description=p36@PDXK | |short_description=p36@PDXK | ||
}} | }} |
Latest revision as of 17:07, 18 September 2015
Short description: | p36@PDXK |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_PDXK_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 55bp_to_ENST00000398078_5end |
EntrezGene: | PDXK |
HGNC: | 8819 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 8.65e-26 | 8 |
male reproductive organ | 4.28e-19 | 11 |
gonad | 1.53e-10 | 21 |
indifferent external genitalia | 1.53e-10 | 21 |
indifferent gonad | 1.53e-10 | 21 |
gonad primordium | 1.53e-10 | 21 |
external genitalia | 4.14e-10 | 22 |
male organism | 4.14e-10 | 22 |
male reproductive system | 4.14e-10 | 22 |